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Merge pull request #14 from gnoblet/gen-dev

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Guillaume NOBLET 2023-01-24 19:48:43 -05:00 • committed by GitHub
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5
DESCRIPTION
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@ -1,7 +1,7 @@
Package: visualizeR Package: visualizeR
Type: Package Type: Package
Title: What a color! What a viz! Title: What a color! What a viz!
Version: 0.6.9000 Version: 0.7.9000
Authors@R: c( Authors@R: c(
person( person(
'Noblet', 'Guillaume', 'Noblet', 'Guillaume',
@ -27,6 +27,7 @@ Imports:
ggtext, ggtext,
ggrepel, ggrepel,
tidyr, tidyr,
dplyr dplyr,
ggalluvial
Suggests: knitr, sf, tmap Suggests: knitr, sf, tmap
VignetteBuilder: knitr VignetteBuilder: knitr

12
NEWS.md
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@ -1,7 +1,17 @@
# visualizeR 0.6.9000 # visualizeR 0.6.9000
* Add `dumbbell()`. * Add `dumbbell()`.
* Add further parameters to `theme_reach()` * Add `alluvial()`
* Add `donut()`
* Add `lollipop()`
* Add further parameters to `theme_reach()`, including grid lines args.
---
# visualizeR 0.6.9000
* Add `dumbbell()`.
* Add further parameters to `theme_reach()`.
--- ---

104
R/alluvial.R Normal file
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@ -0,0 +1,104 @@
#' @title Simple alluvial chart
#'
#' @param df A data frame.
#' @param from A character column of upstream stratum.
#' @param to A character column of downstream stratum.
#' @param value A numeric column of values.
#' @param group The grouping column to fill the alluvium with.
#' @param alpha Fill transparency. Default to 0.5.
#' @param from_levels Order by given from levels?
#' @param value_title The value/y scale title. Default to NULL.
#' @param group_title The group title. Default to NULL.
#' @param title Plot title. Default to NULL.
#' @param subtitle Plot subtitle. Default to NULL.
#' @param caption Plot caption. Default to NULL.
#' @param rect_color Stratum rectangles' fill color.
#' @param rect_border_color Stratum rectangles' border color.
#' @param rect_text_color Stratum rectangles' text color.
#' @param theme Whatever theme. Default to theme_reach().
#'
#' @return A donut chart to be used parsimoniously
#'
#' @export
alluvial <- function(
df,
from,
to,
value,
group = NULL,
alpha = 0.5,
from_levels = NULL,
value_title = NULL,
group_title = NULL,
title = NULL,
subtitle = NULL,
caption = NULL,
rect_color = cols_reach("white"),
rect_border_color = cols_reach("main_grey"),
rect_text_color = cols_reach("main_grey"),
theme = theme_reach(axis_y = FALSE,
legend_position = "none")
){
if(!is.null(from_levels)) df <- dplyr::mutate(df, "{{from}}" := factor({{ from }}, levels = from_levels))
# General mapping
g <- ggplot2::ggplot(
data = df,
mapping = ggplot2::aes(
y = {{ value }},
axis1 = {{ from }},
axis3 = {{ to }}
)
)
# Add alluvium
g <- g +
ggalluvial::geom_alluvium(
ggplot2::aes(
fill = {{ group }},
color = {{ group }}
),
alpha = alpha)
# Add stratum
g <- g +
ggalluvial::geom_stratum(
fill = rect_color,
color = rect_border_color
)
# Add stratum text
stratum <- ggalluvial::StatStratum
g <- g +
ggplot2::geom_text(
stat = stratum,
ggplot2::aes(label = ggplot2::after_stat(!!rlang::sym("stratum"))),
color = cols_reach("main_grey")
)
# Add title, subtitle, caption, x_title, y_title
g <- g + ggplot2::labs(
y = value_title,
title = title,
subtitle = subtitle,
caption = caption,
fill = group_title,
color = group_title
)
# Remove x-axis
g <- g + ggplot2::theme(
axis.line.x = ggplot2::element_blank(),
axis.ticks.x = ggplot2::element_blank(),
axis.text.x = ggplot2::element_blank(),
axis.title.x = ggplot2::element_blank()
)
g <- g + theme
return(g)
}

109
R/donut.R Normal file
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@ -0,0 +1,109 @@
#' @title Simple donut chart (to be used parsimoniously), can be a pie chart
#'
#' @param df A data frame.
#' @param x A character column or coercible as a character column. Will give the donut's fill color.
#' @param y A numeric column.
#' @param alpha Fill transparency.
#' @param x_title The x scale title. Default to NULL.
#' @param title Plot title. Default to NULL.
#' @param subtitle Plot subtitle. Default to NULL.
#' @param caption Plot caption. Default to NULL.
#' @param arrange TRUE or FALSE. Arrange by highest percentage first.
#' @param hole_size Hole size. Default to 3. If less than 2, back to a pie chart.
#' @param add_text TRUE or FALSE. Add the value as text.
#' @param add_text_treshold_display Minimum value to add the text label.
#' @param add_text_color Text color.
#' @param add_text_suffix If percent is FALSE, should we add a suffix to the text label?
#' @param theme Whatever theme. Default to theme_reach().
#'
#' @return A donut chart to be used parsimoniously
#'
#' @export
donut <- function(df,
x,
y,
alpha = 1,
x_title = NULL,
title = NULL,
subtitle = NULL,
caption = NULL,
arrange = TRUE,
hole_size = 3,
add_text = TRUE,
add_text_treshold_display = 5, add_text_color = "white", add_text_suffix = "", theme = theme_reach(legend_reverse = TRUE)){
# Arrange by biggest prop first ?
if (arrange) df <- dplyr::arrange(
df,
{{ y }}
)
# Get levels for scaling
lev <- dplyr::pull(df, {{ x }})
df <- dplyr::mutate(df, "{{x}}" := factor({{ x }}, levels = lev))
# Mapping
g <- ggplot2::ggplot(
df,
mapping = ggplot2::aes(
x = hole_size,
y = {{ y }},
fill = {{ x }},
color = {{ x }}
)
)
# Add rect
g <- g + ggplot2::geom_col(alpha = alpha)
# Add text labels
if (add_text) {
df <- dplyr::mutate(df, y_treshold = ifelse({{ y }} >= add_text_treshold_display, {{ y }}, NA ))
g <- g +
ggplot2::geom_text(
data = df,
ggplot2::aes(
x = hole_size,
y = !!rlang::sym("y_treshold"),
label = paste0({{ y }}, add_text_suffix)),
color = add_text_color,
position = ggplot2::position_stack(vjust = 0.5))
}
# Add title, subtitle, caption, x_title, y_title
g <- g + ggplot2::labs(
title = title,
subtitle = subtitle,
caption = caption,
fill = x_title,
color = x_title
)
# Transform to polar coordinates and adjust hole
g <- g +
ggplot2::coord_polar(
theta = "y"
)
if (hole_size >= 2) g <- g + ggplot2::xlim(c(1, hole_size + 0.5)) # Try to remove that to see how to make a pie chart
# No axis
g <- g + ggplot2::theme(
axis.line.x = ggplot2::element_blank(),
axis.ticks.x = ggplot2::element_blank(),
axis.text.x = ggplot2::element_blank(),
axis.title.x = ggplot2::element_blank(),
axis.line.y = ggplot2::element_blank(),
axis.ticks.y = ggplot2::element_blank(),
axis.text.y = ggplot2::element_blank(),
axis.title.y = ggplot2::element_blank()
)
# Add theme
g <- g + theme
return(g)
}

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R/lollipop.R Normal file
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@ -0,0 +1,121 @@
#' @title Simple bar chart
#'
#' @param df A data frame.
#' @param x A numeric column.
#' @param y A character column or coercible as a character column.
#' @param flip TRUE or FALSE. Default to TRUE or horizontal lollipop plot.
#' @param wrap Should x-labels be wrapped? Number of characters.
#' @param arrange TRUE or FALSE. Arrange by highest percentage first.
#' @param point_size Point size.
#' @param point_color Point color.
#' @param point_alpha Point alpha.
#' @param segment_size Segment size.
#' @param segment_color Segment color.
#' @param segment_alpha Segment alpha.
#' @param alpha Fill transparency.
#' @param x_title The x scale title. Default to NULL.
#' @param y_title The y scale title. Default to NULL.
#' @param title Plot title. Default to NULL.
#' @param subtitle Plot subtitle. Default to NULL.
#' @param caption Plot caption. Default to NULL.
#' @param add_text TRUE or FALSE. Add the y value as text within the bubble.
#' @param add_text_size Text size.
#' @param add_text_suffix If percent is FALSE, should we add a suffix to the text label?
#' @param add_text_color Added text color. Default to white.
#' @param add_text_fontface Added text font face. Default to "bold".
#' @param theme Whatever theme. Default to theme_reach().
#'
#' @return A bar chart
#'
#' @export
lollipop <- function(df,
x,
y,
flip = TRUE,
wrap = NULL,
arrange = TRUE,
point_size = 3,
point_color = cols_reach("main_red"),
point_alpha = 1,
segment_size = 1,
segment_color = cols_reach("main_grey"),
segment_alpha = 1,
alpha = 1,
x_title = NULL,
y_title = NULL,
title = NULL,
subtitle = NULL,
caption = NULL,
add_text = FALSE,
add_text_size = 3,
add_text_suffix = "",
add_text_color = "white",
add_text_fontface = "bold",
theme = theme_reach()){
# Arrange by biggest prop first ?
if (arrange) df <- dplyr::arrange(
df,
{{ y }}
)
# Get levels for scaling
lev <- dplyr::pull(df, {{ x }})
df <- dplyr::mutate(df, "{{x}}" := factor({{ x }}, levels = lev))
# Mapping
g <- ggplot2::ggplot(
df,
mapping = ggplot2::aes(x = {{ x }}, y = {{ y }}, xend = {{ x }}, yend = 0)
)
# Add segment
g <- g + ggplot2::geom_segment(
linewidth = segment_size,
alpha = segment_alpha,
color = segment_color
)
g <- g + ggplot2::geom_point(
size = point_size,
alpha = point_alpha,
color = point_color
)
if (!is.null(wrap)) {
g <- g + ggplot2::scale_x_discrete(labels = scales::label_wrap(wrap))
}
# Because a text legend should always be horizontal, especially for an horizontal bar graph
if (flip){
g <- g + ggplot2::coord_flip()
}
# Add text labels
if (add_text) {
g <- g + ggplot2::geom_text(
ggplot2::aes(
label = paste0({{ y }}, add_text_suffix)),
size = add_text_size,
color = add_text_color,
fontface = add_text_fontface)
}
# Add title, subtitle, caption, x_title, y_title
g <- g + ggplot2::labs(
title = title,
subtitle = subtitle,
caption = caption,
x = x_title,
y = y_title,
)
# Add theme
g <- g + theme
return(g)
}

80
R/theme_reach.R
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@ -29,14 +29,22 @@
#' @param axis_text_size Axis text size. #' @param axis_text_size Axis text size.
#' @param axis_text_color Axis text color. #' @param axis_text_color Axis text color.
#' @param axis_text_font_face Axis text font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic"). #' @param axis_text_font_face Axis text font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic").
#' @param axis_text_x_angle Angle for the x-axis text.
#' @param axis_text_x_vjust Vertical adjustment for the x-axis text.
#' @param axis_text_x_hjust Vertical adjustment for the x-axis text.
#' @param axis_title_size Axis title size. #' @param axis_title_size Axis title size.
#' @param axis_title_color Axis title color. #' @param axis_title_color Axis title color.
#' @param axis_title_font_face Axis title font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic"). #' @param axis_title_font_face Axis title font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic").
#' @param grid_x Boolean. Do you need major grid lines for x-axis? #' @param grid_major_x Boolean. Do you need major grid lines for x-axis?
#' @param grid_y Boolean. Do you need major grid lines for y-axis? #' @param grid_major_y Boolean. Do you need major grid lines for y-axis?
#' @param grid_x_size X line size. #' @param grid_major_x_size Major X line size.
#' @param grid_y_size Y line size. #' @param grid_major_y_size Major Y line size.
#' @param grid_color Grid lines color. #' @param grid_major_color Major grid lines color.
#' @param grid_minor_x Boolean. Do you need minor grid lines for x-axis?
#' @param grid_minor_y Boolean. Do you need minor grid lines for y-axis?
#' @param grid_minor_x_size Minor X line size.
#' @param grid_minor_y_size Minor Y line size.
#' @param grid_minor_color Minor grid lines color.
#' @param caption_position_to_plot TRUE or FALSE. Positioning to plot or to panel? #' @param caption_position_to_plot TRUE or FALSE. Positioning to plot or to panel?
#' @param ... Additional arguments passed to `ggplot2::gg_theme()`. #' @param ... Additional arguments passed to `ggplot2::gg_theme()`.
#' #'
@ -50,7 +58,7 @@ theme_reach <- function(
palette = "main", palette = "main",
discrete = TRUE, discrete = TRUE,
reverse = FALSE, reverse = FALSE,
font_family = "Leelawadee", font_family = "Segoe UI",
title_size = 12, title_size = 12,
title_color = cols_reach("main_grey"), title_color = cols_reach("main_grey"),
title_font_face = "bold", title_font_face = "bold",
@ -76,11 +84,19 @@ theme_reach <- function(
axis_title_size = 11, axis_title_size = 11,
axis_title_color = cols_reach("main_grey"), axis_title_color = cols_reach("main_grey"),
axis_title_font_face = "bold", axis_title_font_face = "bold",
grid_x = FALSE, axis_text_x_angle = 0,
grid_y = FALSE, axis_text_x_vjust = 0.5,
grid_color = cols_reach("main_lt_grey"), axis_text_x_hjust = 0.5,
grid_x_size = 0.1, grid_major_x = FALSE,
grid_y_size = 0.1, grid_major_y = FALSE,
grid_major_color = cols_reach("main_lt_grey"),
grid_major_x_size = 0.1,
grid_major_y_size = 0.1,
grid_minor_x = FALSE,
grid_minor_y = FALSE,
grid_minor_color = cols_reach("main_lt_grey"),
grid_minor_x_size = 0.05,
grid_minor_y_size = 0.05,
caption_position_to_plot = TRUE, caption_position_to_plot = TRUE,
... ...
) { ) {
@ -114,9 +130,6 @@ theme_reach <- function(
panel.background = ggplot2::element_rect( panel.background = ggplot2::element_rect(
fill = panel_background_color fill = panel_background_color
), ),
# Remove minor grid lines
panel.grid.minor.x = ggplot2::element_blank(),
panel.grid.minor.y = ggplot2::element_blank(),
# Remove background for legend key # Remove background for legend key
legend.key = ggplot2::element_blank(), legend.key = ggplot2::element_blank(),
# Text sizes # Text sizes
@ -145,6 +158,11 @@ theme_reach <- function(
face = legend_text_font_face, face = legend_text_font_face,
family = font_family, family = font_family,
color = legend_text_color color = legend_text_color
),
axis.text.x = ggplot2::element_text(
angle = axis_text_x_angle,
vjust = axis_text_x_vjust,
hjust = axis_text_x_hjust
) )
) )
@ -184,25 +202,47 @@ theme_reach <- function(
} }
# X - major grid lines # X - major grid lines
if (!grid_x) theme_reach <- theme_reach + if (!grid_major_x) theme_reach <- theme_reach +
ggplot2::theme( ggplot2::theme(
panel.grid.major.x = ggplot2::element_blank() panel.grid.major.x = ggplot2::element_blank()
) else theme_reach <- theme_reach + ) else theme_reach <- theme_reach +
ggplot2::theme( ggplot2::theme(
panel.grid.major.x = ggplot2::element_line( panel.grid.major.x = ggplot2::element_line(
color = grid_color, color = grid_major_color,
linewidth = grid_y_size) linewidth = grid_major_x_size)
) )
# Y - major grid lines # Y - major grid lines
if (!grid_y) theme_reach <- theme_reach + if (!grid_major_y) theme_reach <- theme_reach +
ggplot2::theme( ggplot2::theme(
panel.grid.major.y = ggplot2::element_blank() panel.grid.major.y = ggplot2::element_blank()
) else theme_reach <- theme_reach + ) else theme_reach <- theme_reach +
ggplot2::theme( ggplot2::theme(
panel.grid.major.y = ggplot2::element_line( panel.grid.major.y = ggplot2::element_line(
color = grid_color, color = grid_major_color,
linewidth = grid_y_size) linewidth = grid_major_y_size)
)
# X - minor grid lines
if (!grid_minor_x) theme_reach <- theme_reach +
ggplot2::theme(
panel.grid.minor.x = ggplot2::element_blank()
) else theme_reach <- theme_reach +
ggplot2::theme(
panel.grid.minor.x = ggplot2::element_line(
color = grid_minor_color,
linewidth = grid_minor_x_size)
)
# Y - minor grid lines
if (!grid_minor_y) theme_reach <- theme_reach +
ggplot2::theme(
panel.grid.minor.y = ggplot2::element_blank()
) else theme_reach <- theme_reach +
ggplot2::theme(
panel.grid.minor.y = ggplot2::element_line(
color = grid_minor_color,
linewidth = grid_minor_y_size)
) )
# Other parameters # Other parameters

127
README.Rmd
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@ -43,10 +43,11 @@ Roadmap is as follows:
- [X] Add IMPACT's colors - [X] Add IMPACT's colors
- [X] Add all color palettes from the internal documentation - [X] Add all color palettes from the internal documentation
- [ ] There remains to be added more-than-7-color palettes and black color palettes - [ ] There remains to be added more-than-7-color palettes and black color palettes
- [ ] Add new types of visualization (e.g. dumbbell plot) - [X] Add new types of visualization (e.g. dumbbell plot, lollipop plot, etc.)
- [ ] Use examples - [X] Use examples
- [ ] Add some ease-map functions - [ ] Add some ease-map functions
- [ ] Add some interactive functions (maps and graphs) - [ ] Add some interactive functions (maps and graphs)
- [ ] Consolidate and make errors transparent
## Request ## Request
@ -73,7 +74,7 @@ pal_reach(show_palettes = T)
### Example 1: Bar chart, already REACH themed ### Example 1: Bar chart, already REACH themed
```{r example-bar-chart, eval = TRUE} ```{r example-bar-chart, out.width = "65%", eval = TRUE}
library(visualizeR) library(visualizeR)
library(palmerpenguins) library(palmerpenguins)
library(dplyr) library(dplyr)
@ -100,7 +101,7 @@ bar(df, island, mean_bl, species, group_title = "Species", flip = FALSE, add_tex
At this stage, `point_reach()` only supports categorical grouping colors with the `group` arg. At this stage, `point_reach()` only supports categorical grouping colors with the `group` arg.
```{r example-point-chart, eval = TRUE} ```{r example-point-chart, out.width = "65%", eval = TRUE}
# Simple point chart # Simple point chart
point(penguins, bill_length_mm, flipper_length_mm) point(penguins, bill_length_mm, flipper_length_mm)
@ -109,39 +110,143 @@ point(penguins, bill_length_mm, flipper_length_mm)
point(penguins, bill_length_mm, flipper_length_mm, island, alpha = 0.6, size = 3, theme = theme_reach(reverse = TRUE)) point(penguins, bill_length_mm, flipper_length_mm, island, alpha = 0.6, size = 3, theme = theme_reach(reverse = TRUE))
# Using another color palettes # Using another color palettes
point(penguins, bill_length_mm, flipper_length_mm, island, size = 1.5, x_title = "Bill", y_title = "Flipper", title = "Length (mm)", theme = theme_reach(palette = "artichoke_3", text_font_face = , grid_x = T, title_position_to_plot = FALSE)) point(penguins, bill_length_mm, flipper_length_mm, island, size = 1.5, x_title = "Bill", y_title = "Flipper", title = "Length (mm)", theme = theme_reach(palette = "artichoke_3", text_font_face = , grid_major_x = TRUE, title_position_to_plot = FALSE))
``` ```
### Example 3! Dumbbell plot, REACH themed ### Example 3: Dumbbell plot, REACH themed
Remember to ensure that your data are in the long format and you only have two groups on the x-axis; for instance, IDP and returnee and no NA values. Remember to ensure that your data are in the long format and you only have two groups on the x-axis; for instance, IDP and returnee and no NA values.
```{r example-dumbbell-plot, eval = TRUE} ```{r example-dumbbell-plot, out.width = "65%", eval = TRUE}
# Prepare long data # Prepare long data
df <- tibble::tibble( df <- tibble::tibble(
admin1 = rep(c("A", "B", "C", "D", "E", "F", "G", "H"), 2), admin1 = rep(letters[1:8], 2),
setting = c(rep(c("Rural", "Urban"), 4), rep(c("Urban", "Rural"), 4)), setting = c(rep(c("Rural", "Urban"), 4), rep(c("Urban", "Rural"), 4)),
stat = rnorm(16, mean = 50, sd = 18) stat = rnorm(16, mean = 50, sd = 18)
) |> ) |>
dplyr::mutate(stat = round(stat, 0)) dplyr::mutate(stat = round(stat, 0))
# Example # Example, adding a parameter to `theme_reach()` passed on `ggplot2::theme()` to align legend title
dumbbell(df, dumbbell(df,
stat, stat,
setting, setting,
admin1, admin1,
title = "% of HHs that reported open defecation as sanitation facility", title = "% of HHs that reported open defecation as sanitation facility",
group_y_title = "Admin 1", group_y_title = "Admin 1",
group_x_title = "Setting",
theme = theme_reach(legend_position = "bottom", theme = theme_reach(legend_position = "bottom",
legend_direction = "horizontal", legend_direction = "horizontal",
legend_title_font_face = "bold",
palette = "primary", palette = "primary",
title_position_to_plot = FALSE)) title_position_to_plot = FALSE,
legend.title.align = 0.5)) +
# Change legend title position (could be included as part of the function)
ggplot2::guides(
color = ggplot2::guide_legend(title.position = "left"),
fill = ggplot2::guide_legend(title.position = "left")
)
``` ```
### Example 4: donut chart, REACH themed (to used moderately)
```{r example-donut-plot, out.width = "65%", warning = FALSE}
# Some summarized data: % of HHs by displacement status
df <- tibble::tibble(
status = c("Displaced", "Non displaced", "Returnee", "Don't know/Prefer not to say"),
percentage = c(18, 65, 12, 3)
)
# Donut
donut(df,
status,
percentage,
hole_size = 3,
add_text_suffix = "%",
add_text_color = cols_reach("dk_grey"),
add_text_treshold_display = 5,
x_title = "Displacement status",
title = "% of HHs by displacement status",
theme = theme_reach(legend_reverse = TRUE))
```
### Example 5: alluvial chart, REACH themed
```{r example-alluvial-plot, out.width = "65%", warning = FALSE}
# Some summarized data: % of HHs by self-reported status of displacement in 2021 and in 2022
df <- tibble::tibble(
status_from = c(rep("Displaced", 4),
rep("Non displaced", 4),
rep("Returnee", 4),
rep("Dnk/Pnts", 4)),
status_to = c("Displaced", "Non displaced", "Returnee", "Dnk/Pnts", "Displaced", "Non displaced", "Returnee", "Dnk/Pnts", "Displaced", "Non displaced", "Returnee", "Dnk/Pnts", "Displaced", "Non displaced", "Returnee", "Dnk/Pnts"),
percentage = c(20, 8, 18, 1, 12, 21, 0, 2, 0, 3, 12, 1, 0, 0, 1, 1)
)
# Alluvial, here the group is the status for 2021
alluvial(df,
status_from,
status_to,
percentage,
status_from,
from_levels = c("Displaced", "Non displaced", "Returnee", "Dnk/Pnts"),
alpha = 0.8,
group_title = "Status for 2021",
title = "% of HHs by self-reported status from 2021 to 2022",
theme = theme_reach(
axis_y = FALSE,
legend_position = "none"))
```
### Example 6: lollipop chart
```{r example-lollipop-chart, out.width = "65%", warning = FALSE}
library(tidyr)
# Prepare long data
df <- tibble::tibble(
admin1 = replicate(15, sample(letters, 8)) |> t() |> as.data.frame() |> unite("admin1", sep = "") |> dplyr::pull(admin1),
stat = rnorm(15, mean = 50, sd = 15)) |>
dplyr::mutate(stat = round(stat, 0))
# Make lollipop plot, REACH themed, vertical with 45 degrees angle X-labels
lollipop(df,
admin1,
stat,
arrange = FALSE,
add_text = FALSE,
flip = FALSE,
y_title = "% of HHs",
x_title = "Admin 1",
title = "% of HHs that reported having received a humanitarian assistance",
theme = theme_reach(axis_text_x_angle = 45,
grid_major_y = TRUE,
grid_major_y_size = 0.2,
grid_major_x = TRUE,
grid_minor_y = TRUE))
# Horizontal, greater point size, arranged by value, no grid, and text labels added
lollipop(df,
admin1,
stat,
arrange = TRUE,
point_size = 10,
point_color = cols_reach("main_beige"),
segment_size = 2,
add_text = TRUE,
add_text_suffix = "%",
y_title = "% of HHs",
x_title = "Admin 1",
title = "% of HHs that reported having received a humanitarian assistance in the 12 months prior to the assessment",
theme = theme_reach(title_position_to_plot = FALSE))
```
## Maps ## Maps
```{r example-map} ```{r example-map, out.width = "50%"}
# Add indicator layer # Add indicator layer
# - based on "pretty" classes and title "Proportion (%)" # - based on "pretty" classes and title "Proportion (%)"

141
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@ -27,10 +27,12 @@ Roadmap is as follows:
- [x] Add all color palettes from the internal documentation - [x] Add all color palettes from the internal documentation
- [ ] There remains to be added more-than-7-color palettes and black - [ ] There remains to be added more-than-7-color palettes and black
color palettes color palettes
- [ ] Add new types of visualization (e.g. dumbbell plot) - [x] Add new types of visualization (e.g. dumbbell plot, lollipop
- [ ] Use examples plot, etc.)
- [x] Use examples
- [ ] Add some ease-map functions - [ ] Add some ease-map functions
- [ ] Add some interactive functions (maps and graphs) - [ ] Add some interactive functions (maps and graphs)
- [ ] Consolidate and make errors transparent
## Request ## Request
@ -93,21 +95,21 @@ df <- penguins |>
bar(df, island, mean_bl, species, percent = FALSE, alpha = 0.6, x_title = "Mean of bill length") bar(df, island, mean_bl, species, percent = FALSE, alpha = 0.6, x_title = "Mean of bill length")
``` ```
<img src="man/figures/README-example-bar-chart-1.png" width="100%" /> <img src="man/figures/README-example-bar-chart-1.png" width="65%" />
``` r ``` r
# Using another color palette through `theme_reach()` and changing scale to percent # Using another color palette through `theme_reach()` and changing scale to percent
bar(df, island,mean_bl, species, percent = TRUE, theme = theme_reach(palette = "artichoke_3")) bar(df, island,mean_bl, species, percent = TRUE, theme = theme_reach(palette = "artichoke_3"))
``` ```
<img src="man/figures/README-example-bar-chart-2.png" width="100%" /> <img src="man/figures/README-example-bar-chart-2.png" width="65%" />
``` r ``` r
# Not flipped, with text added, group_title, no y-axis and no bold for legend # Not flipped, with text added, group_title, no y-axis and no bold for legend
bar(df, island, mean_bl, species, group_title = "Species", flip = FALSE, add_text = TRUE, add_text_suffix = "%", percent = FALSE, theme = theme_reach(text_font_face = "plain", axis_y = FALSE)) bar(df, island, mean_bl, species, group_title = "Species", flip = FALSE, add_text = TRUE, add_text_suffix = "%", percent = FALSE, theme = theme_reach(text_font_face = "plain", axis_y = FALSE))
``` ```
<img src="man/figures/README-example-bar-chart-3.png" width="100%" /> <img src="man/figures/README-example-bar-chart-3.png" width="65%" />
### Example 2: Point chart, already REACH themed ### Example 2: Point chart, already REACH themed
@ -119,23 +121,23 @@ with the `group` arg.
point(penguins, bill_length_mm, flipper_length_mm) point(penguins, bill_length_mm, flipper_length_mm)
``` ```
<img src="man/figures/README-example-point-chart-1.png" width="100%" /> <img src="man/figures/README-example-point-chart-1.png" width="65%" />
``` r ``` r
# Point chart with grouping colors, greater dot size, some transparency, reversed color palette # Point chart with grouping colors, greater dot size, some transparency, reversed color palette
point(penguins, bill_length_mm, flipper_length_mm, island, alpha = 0.6, size = 3, theme = theme_reach(reverse = TRUE)) point(penguins, bill_length_mm, flipper_length_mm, island, alpha = 0.6, size = 3, theme = theme_reach(reverse = TRUE))
``` ```
<img src="man/figures/README-example-point-chart-2.png" width="100%" /> <img src="man/figures/README-example-point-chart-2.png" width="65%" />
``` r ``` r
# Using another color palettes # Using another color palettes
point(penguins, bill_length_mm, flipper_length_mm, island, size = 1.5, x_title = "Bill", y_title = "Flipper", title = "Length (mm)", theme = theme_reach(palette = "artichoke_3", text_font_face = , grid_x = T, title_position_to_plot = FALSE)) point(penguins, bill_length_mm, flipper_length_mm, island, size = 1.5, x_title = "Bill", y_title = "Flipper", title = "Length (mm)", theme = theme_reach(palette = "artichoke_3", text_font_face = , grid_major_x = TRUE, title_position_to_plot = FALSE))
``` ```
<img src="man/figures/README-example-point-chart-3.png" width="100%" /> <img src="man/figures/README-example-point-chart-3.png" width="65%" />
### Example 3! Dumbbell plot, REACH themed ### Example 3: Dumbbell plot, REACH themed
Remember to ensure that your data are in the long format and you only Remember to ensure that your data are in the long format and you only
have two groups on the x-axis; for instance, IDP and returnee and no NA have two groups on the x-axis; for instance, IDP and returnee and no NA
@ -144,26 +146,137 @@ values.
``` r ``` r
# Prepare long data # Prepare long data
df <- tibble::tibble( df <- tibble::tibble(
admin1 = rep(c("A", "B", "C", "D", "E", "F", "G", "H"), 2), admin1 = rep(letters[1:8], 2),
setting = c(rep(c("Rural", "Urban"), 4), rep(c("Urban", "Rural"), 4)), setting = c(rep(c("Rural", "Urban"), 4), rep(c("Urban", "Rural"), 4)),
stat = rnorm(16, mean = 50, sd = 18) stat = rnorm(16, mean = 50, sd = 18)
) |> ) |>
dplyr::mutate(stat = round(stat, 0)) dplyr::mutate(stat = round(stat, 0))
# Example # Example, adding a parameter to `theme_reach()` passed on `ggplot2::theme()` to align legend title
dumbbell(df, dumbbell(df,
stat, stat,
setting, setting,
admin1, admin1,
title = "% of HHs that reported open defecation as sanitation facility", title = "% of HHs that reported open defecation as sanitation facility",
group_y_title = "Admin 1", group_y_title = "Admin 1",
group_x_title = "Setting",
theme = theme_reach(legend_position = "bottom", theme = theme_reach(legend_position = "bottom",
legend_direction = "horizontal", legend_direction = "horizontal",
legend_title_font_face = "bold",
palette = "primary", palette = "primary",
title_position_to_plot = FALSE)) title_position_to_plot = FALSE,
legend.title.align = 0.5)) +
# Change legend title position (could be included as part of the function)
ggplot2::guides(
color = ggplot2::guide_legend(title.position = "left"),
fill = ggplot2::guide_legend(title.position = "left")
)
``` ```
<img src="man/figures/README-example-dumbbell-plot-1.png" width="100%" /> <img src="man/figures/README-example-dumbbell-plot-1.png" width="65%" />
### Example 4: donut chart, REACH themed (to used moderately)
``` r
# Some summarized data: % of HHs by displacement status
df <- tibble::tibble(
status = c("Displaced", "Non displaced", "Returnee", "Don't know/Prefer not to say"),
percentage = c(18, 65, 12, 3)
)
# Donut
donut(df,
status,
percentage,
hole_size = 3,
add_text_suffix = "%",
add_text_color = cols_reach("dk_grey"),
add_text_treshold_display = 5,
x_title = "Displacement status",
title = "% of HHs by displacement status",
theme = theme_reach(legend_reverse = TRUE))
```
<img src="man/figures/README-example-donut-plot-1.png" width="65%" />
### Example 5: alluvial chart, REACH themed
``` r
# Some summarized data: % of HHs by self-reported status of displacement in 2021 and in 2022
df <- tibble::tibble(
status_from = c(rep("Displaced", 4),
rep("Non displaced", 4),
rep("Returnee", 4),
rep("Dnk/Pnts", 4)),
status_to = c("Displaced", "Non displaced", "Returnee", "Dnk/Pnts", "Displaced", "Non displaced", "Returnee", "Dnk/Pnts", "Displaced", "Non displaced", "Returnee", "Dnk/Pnts", "Displaced", "Non displaced", "Returnee", "Dnk/Pnts"),
percentage = c(20, 8, 18, 1, 12, 21, 0, 2, 0, 3, 12, 1, 0, 0, 1, 1)
)
# Alluvial, here the group is the status for 2021
alluvial(df,
status_from,
status_to,
percentage,
status_from,
from_levels = c("Displaced", "Non displaced", "Returnee", "Dnk/Pnts"),
alpha = 0.8,
group_title = "Status for 2021",
title = "% of HHs by self-reported status from 2021 to 2022",
theme = theme_reach(
axis_y = FALSE,
legend_position = "none"))
```
<img src="man/figures/README-example-alluvial-plot-1.png" width="65%" />
### Example 6: lollipop chart
``` r
library(tidyr)
# Prepare long data
df <- tibble::tibble(
admin1 = replicate(15, sample(letters, 8)) |> t() |> as.data.frame() |> unite("admin1", sep = "") |> dplyr::pull(admin1),
stat = rnorm(15, mean = 50, sd = 15)) |>
dplyr::mutate(stat = round(stat, 0))
# Make lollipop plot, REACH themed, vertical with 45 degrees angle X-labels
lollipop(df,
admin1,
stat,
arrange = FALSE,
add_text = FALSE,
flip = FALSE,
y_title = "% of HHs",
x_title = "Admin 1",
title = "% of HHs that reported having received a humanitarian assistance",
theme = theme_reach(axis_text_x_angle = 45,
grid_major_y = TRUE,
grid_major_y_size = 0.2,
grid_major_x = TRUE,
grid_minor_y = TRUE))
```
<img src="man/figures/README-example-lollipop-chart-1.png" width="65%" />
``` r
# Horizontal, greater point size, arranged by value, no grid, and text labels added
lollipop(df,
admin1,
stat,
arrange = TRUE,
point_size = 10,
point_color = cols_reach("main_beige"),
segment_size = 2,
add_text = TRUE,
add_text_suffix = "%",
y_title = "% of HHs",
x_title = "Admin 1",
title = "% of HHs that reported having received a humanitarian assistance in the 12 months prior to the assessment",
theme = theme_reach(title_position_to_plot = FALSE))
```
<img src="man/figures/README-example-lollipop-chart-2.png" width="65%" />
## Maps ## Maps

2
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@ -31,7 +31,7 @@
<a class="navbar-brand me-2" href="https://gnoblet.github.io/visualizeR/index.html">visualizeR</a> <a class="navbar-brand me-2" href="https://gnoblet.github.io/visualizeR/index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
docs/LICENSE.html
View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="index.html">visualizeR</a> <a class="navbar-brand me-2" href="index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

6
docs/authors.html
View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="index.html">visualizeR</a> <a class="navbar-brand me-2" href="index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -56,7 +56,7 @@
<h2 id="citation">Citation</h2> <h2 id="citation">Citation</h2>
<p><small class="dont-index">Source: <a href="https://github.com/gnoblet/visualizeR/blob/HEAD/DESCRIPTION" class="external-link"><code>DESCRIPTION</code></a></small></p> <p><small class="dont-index">Source: <a href="https://github.com/gnoblet/visualizeR/blob/HEAD/DESCRIPTION" class="external-link"><code>DESCRIPTION</code></a></small></p>
<p>Guillaume N (2022). <p>Guillaume N (2023).
<em>visualizeR: What a color! What a viz!</em>. <em>visualizeR: What a color! What a viz!</em>.
https://github.com/gnoblet/visualizeR, https://github.com/gnoblet/visualizeR,
https://gnoblet.github.io/visualizeR/. https://gnoblet.github.io/visualizeR/.
@ -64,7 +64,7 @@ https://gnoblet.github.io/visualizeR/.
<pre>@Manual{, <pre>@Manual{,
title = {visualizeR: What a color! What a viz!}, title = {visualizeR: What a color! What a viz!},
author = {Noblet Guillaume}, author = {Noblet Guillaume},
year = {2022}, year = {2023},
note = {https://github.com/gnoblet/visualizeR, note = {https://github.com/gnoblet/visualizeR,
https://gnoblet.github.io/visualizeR/}, https://gnoblet.github.io/visualizeR/},
}</pre> }</pre>

139
docs/index.html
View file

@ -33,7 +33,7 @@
<a class="navbar-brand me-2" href="index.html">visualizeR</a> <a class="navbar-brand me-2" href="index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -94,13 +94,15 @@
<li> <li>
<input type="checkbox" disabled>There remains to be added more-than-7-color palettes and black color palettes</li> <input type="checkbox" disabled>There remains to be added more-than-7-color palettes and black color palettes</li>
<li> <li>
<input type="checkbox" disabled>Add new types of visualization (e.g. dumbbell plot)</li> <input type="checkbox" disabled checked>Add new types of visualization (e.g. dumbbell plot, lollipop plot, etc.)</li>
<li> <li>
<input type="checkbox" disabled>Use examples</li> <input type="checkbox" disabled checked>Use examples</li>
<li> <li>
<input type="checkbox" disabled>Add some ease-map functions</li> <input type="checkbox" disabled>Add some ease-map functions</li>
<li> <li>
<input type="checkbox" disabled>Add some interactive functions (maps and graphs)</li> <input type="checkbox" disabled>Add some interactive functions (maps and graphs)</li>
<li>
<input type="checkbox" disabled>Consolidate and make errors transparent</li>
</ul> </ul>
</div> </div>
<div class="section level2"> <div class="section level2">
@ -158,15 +160,15 @@
<span></span> <span></span>
<span><span class="co"># Simple bar chart by group with some alpha transparency</span></span> <span><span class="co"># Simple bar chart by group with some alpha transparency</span></span>
<span><span class="fu"><a href="reference/bar.html">bar</a></span><span class="op">(</span><span class="va">df</span>, <span class="va">island</span>, <span class="va">mean_bl</span>, <span class="va">species</span>, percent <span class="op">=</span> <span class="cn">FALSE</span>, alpha <span class="op">=</span> <span class="fl">0.6</span>, x_title <span class="op">=</span> <span class="st">"Mean of bill length"</span><span class="op">)</span></span></code></pre></div> <span><span class="fu"><a href="reference/bar.html">bar</a></span><span class="op">(</span><span class="va">df</span>, <span class="va">island</span>, <span class="va">mean_bl</span>, <span class="va">species</span>, percent <span class="op">=</span> <span class="cn">FALSE</span>, alpha <span class="op">=</span> <span class="fl">0.6</span>, x_title <span class="op">=</span> <span class="st">"Mean of bill length"</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-bar-chart-1.png" width="100%"></p> <p><img src="reference/figures/README-example-bar-chart-1.png" width="65%"></p>
<div class="sourceCode" id="cb4"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb4"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Using another color palette through `theme_reach()` and changing scale to percent</span></span> <code class="sourceCode R"><span><span class="co"># Using another color palette through `theme_reach()` and changing scale to percent</span></span>
<span><span class="fu"><a href="reference/bar.html">bar</a></span><span class="op">(</span><span class="va">df</span>, <span class="va">island</span>,<span class="va">mean_bl</span>, <span class="va">species</span>, percent <span class="op">=</span> <span class="cn">TRUE</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>palette <span class="op">=</span> <span class="st">"artichoke_3"</span><span class="op">)</span><span class="op">)</span></span></code></pre></div> <span><span class="fu"><a href="reference/bar.html">bar</a></span><span class="op">(</span><span class="va">df</span>, <span class="va">island</span>,<span class="va">mean_bl</span>, <span class="va">species</span>, percent <span class="op">=</span> <span class="cn">TRUE</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>palette <span class="op">=</span> <span class="st">"artichoke_3"</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-bar-chart-2.png" width="100%"></p> <p><img src="reference/figures/README-example-bar-chart-2.png" width="65%"></p>
<div class="sourceCode" id="cb5"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb5"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Not flipped, with text added, group_title, no y-axis and no bold for legend</span></span> <code class="sourceCode R"><span><span class="co"># Not flipped, with text added, group_title, no y-axis and no bold for legend</span></span>
<span><span class="fu"><a href="reference/bar.html">bar</a></span><span class="op">(</span><span class="va">df</span>, <span class="va">island</span>, <span class="va">mean_bl</span>, <span class="va">species</span>, group_title <span class="op">=</span> <span class="st">"Species"</span>, flip <span class="op">=</span> <span class="cn">FALSE</span>, add_text <span class="op">=</span> <span class="cn">TRUE</span>, add_text_suffix <span class="op">=</span> <span class="st">"%"</span>, percent <span class="op">=</span> <span class="cn">FALSE</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>text_font_face <span class="op">=</span> <span class="st">"plain"</span>, axis_y <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div> <span><span class="fu"><a href="reference/bar.html">bar</a></span><span class="op">(</span><span class="va">df</span>, <span class="va">island</span>, <span class="va">mean_bl</span>, <span class="va">species</span>, group_title <span class="op">=</span> <span class="st">"Species"</span>, flip <span class="op">=</span> <span class="cn">FALSE</span>, add_text <span class="op">=</span> <span class="cn">TRUE</span>, add_text_suffix <span class="op">=</span> <span class="st">"%"</span>, percent <span class="op">=</span> <span class="cn">FALSE</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>text_font_face <span class="op">=</span> <span class="st">"plain"</span>, axis_y <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-bar-chart-3.png" width="100%"></p> <p><img src="reference/figures/README-example-bar-chart-3.png" width="65%"></p>
</div> </div>
<div class="section level3"> <div class="section level3">
<h3 id="example-2-point-chart-already-reach-themed">Example 2: Point chart, already REACH themed<a class="anchor" aria-label="anchor" href="#example-2-point-chart-already-reach-themed"></a> <h3 id="example-2-point-chart-already-reach-themed">Example 2: Point chart, already REACH themed<a class="anchor" aria-label="anchor" href="#example-2-point-chart-already-reach-themed"></a>
@ -175,47 +177,152 @@
<div class="sourceCode" id="cb6"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb6"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Simple point chart</span></span> <code class="sourceCode R"><span><span class="co"># Simple point chart</span></span>
<span><span class="fu"><a href="reference/point.html">point</a></span><span class="op">(</span><span class="va">penguins</span>, <span class="va">bill_length_mm</span>, <span class="va">flipper_length_mm</span><span class="op">)</span></span></code></pre></div> <span><span class="fu"><a href="reference/point.html">point</a></span><span class="op">(</span><span class="va">penguins</span>, <span class="va">bill_length_mm</span>, <span class="va">flipper_length_mm</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-point-chart-1.png" width="100%"></p> <p><img src="reference/figures/README-example-point-chart-1.png" width="65%"></p>
<div class="sourceCode" id="cb7"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb7"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Point chart with grouping colors, greater dot size, some transparency, reversed color palette</span></span> <code class="sourceCode R"><span><span class="co"># Point chart with grouping colors, greater dot size, some transparency, reversed color palette</span></span>
<span><span class="fu"><a href="reference/point.html">point</a></span><span class="op">(</span><span class="va">penguins</span>, <span class="va">bill_length_mm</span>, <span class="va">flipper_length_mm</span>, <span class="va">island</span>, alpha <span class="op">=</span> <span class="fl">0.6</span>, size <span class="op">=</span> <span class="fl">3</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>reverse <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div> <span><span class="fu"><a href="reference/point.html">point</a></span><span class="op">(</span><span class="va">penguins</span>, <span class="va">bill_length_mm</span>, <span class="va">flipper_length_mm</span>, <span class="va">island</span>, alpha <span class="op">=</span> <span class="fl">0.6</span>, size <span class="op">=</span> <span class="fl">3</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>reverse <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-point-chart-2.png" width="100%"></p> <p><img src="reference/figures/README-example-point-chart-2.png" width="65%"></p>
<div class="sourceCode" id="cb8"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb8"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Using another color palettes</span></span> <code class="sourceCode R"><span><span class="co"># Using another color palettes</span></span>
<span><span class="fu"><a href="reference/point.html">point</a></span><span class="op">(</span><span class="va">penguins</span>, <span class="va">bill_length_mm</span>, <span class="va">flipper_length_mm</span>, <span class="va">island</span>, size <span class="op">=</span> <span class="fl">1.5</span>, x_title <span class="op">=</span> <span class="st">"Bill"</span>, y_title <span class="op">=</span> <span class="st">"Flipper"</span>, title <span class="op">=</span> <span class="st">"Length (mm)"</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>palette <span class="op">=</span> <span class="st">"artichoke_3"</span>, text_font_face <span class="op">=</span> , grid_x <span class="op">=</span> <span class="cn">T</span>, title_position_to_plot <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div> <span><span class="fu"><a href="reference/point.html">point</a></span><span class="op">(</span><span class="va">penguins</span>, <span class="va">bill_length_mm</span>, <span class="va">flipper_length_mm</span>, <span class="va">island</span>, size <span class="op">=</span> <span class="fl">1.5</span>, x_title <span class="op">=</span> <span class="st">"Bill"</span>, y_title <span class="op">=</span> <span class="st">"Flipper"</span>, title <span class="op">=</span> <span class="st">"Length (mm)"</span>, theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>palette <span class="op">=</span> <span class="st">"artichoke_3"</span>, text_font_face <span class="op">=</span> , grid_major_x <span class="op">=</span> <span class="cn">TRUE</span>, title_position_to_plot <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-point-chart-3.png" width="100%"></p> <p><img src="reference/figures/README-example-point-chart-3.png" width="65%"></p>
</div> </div>
<div class="section level3"> <div class="section level3">
<h3 id="example-3-dumbbell-plot-reach-themed">Example 3! Dumbbell plot, REACH themed<a class="anchor" aria-label="anchor" href="#example-3-dumbbell-plot-reach-themed"></a> <h3 id="example-3-dumbbell-plot-reach-themed">Example 3: Dumbbell plot, REACH themed<a class="anchor" aria-label="anchor" href="#example-3-dumbbell-plot-reach-themed"></a>
</h3> </h3>
<p>Remember to ensure that your data are in the long format and you only have two groups on the x-axis; for instance, IDP and returnee and no NA values.</p> <p>Remember to ensure that your data are in the long format and you only have two groups on the x-axis; for instance, IDP and returnee and no NA values.</p>
<div class="sourceCode" id="cb9"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb9"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Prepare long data</span></span> <code class="sourceCode R"><span><span class="co"># Prepare long data</span></span>
<span><span class="va">df</span> <span class="op">&lt;-</span> <span class="fu">tibble</span><span class="fu">::</span><span class="fu"><a href="https://tibble.tidyverse.org/reference/tibble.html" class="external-link">tibble</a></span><span class="op">(</span></span> <span><span class="va">df</span> <span class="op">&lt;-</span> <span class="fu">tibble</span><span class="fu">::</span><span class="fu"><a href="https://tibble.tidyverse.org/reference/tibble.html" class="external-link">tibble</a></span><span class="op">(</span></span>
<span> admin1 <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"A"</span>, <span class="st">"B"</span>, <span class="st">"C"</span>, <span class="st">"D"</span>, <span class="st">"E"</span>, <span class="st">"F"</span>, <span class="st">"G"</span>, <span class="st">"H"</span><span class="op">)</span>, <span class="fl">2</span><span class="op">)</span>,</span> <span> admin1 <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="va">letters</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">8</span><span class="op">]</span>, <span class="fl">2</span><span class="op">)</span>,</span>
<span> setting <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Rural"</span>, <span class="st">"Urban"</span><span class="op">)</span>, <span class="fl">4</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Urban"</span>, <span class="st">"Rural"</span><span class="op">)</span>, <span class="fl">4</span><span class="op">)</span><span class="op">)</span>,</span> <span> setting <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Rural"</span>, <span class="st">"Urban"</span><span class="op">)</span>, <span class="fl">4</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Urban"</span>, <span class="st">"Rural"</span><span class="op">)</span>, <span class="fl">4</span><span class="op">)</span><span class="op">)</span>,</span>
<span> stat <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/stats/Normal.html" class="external-link">rnorm</a></span><span class="op">(</span><span class="fl">16</span>, mean <span class="op">=</span> <span class="fl">50</span>, sd <span class="op">=</span> <span class="fl">18</span><span class="op">)</span></span> <span> stat <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/stats/Normal.html" class="external-link">rnorm</a></span><span class="op">(</span><span class="fl">16</span>, mean <span class="op">=</span> <span class="fl">50</span>, sd <span class="op">=</span> <span class="fl">18</span><span class="op">)</span></span>
<span><span class="op">)</span> <span class="op">|&gt;</span></span> <span><span class="op">)</span> <span class="op">|&gt;</span></span>
<span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/mutate.html" class="external-link">mutate</a></span><span class="op">(</span>stat <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/Round.html" class="external-link">round</a></span><span class="op">(</span><span class="va">stat</span>, <span class="fl">0</span><span class="op">)</span><span class="op">)</span></span> <span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/mutate.html" class="external-link">mutate</a></span><span class="op">(</span>stat <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/Round.html" class="external-link">round</a></span><span class="op">(</span><span class="va">stat</span>, <span class="fl">0</span><span class="op">)</span><span class="op">)</span></span>
<span></span> <span></span>
<span><span class="co"># Example</span></span> <span><span class="co"># Example, adding a parameter to `theme_reach()` passed on `ggplot2::theme()` to align legend title</span></span>
<span><span class="fu"><a href="reference/dumbbell.html">dumbbell</a></span><span class="op">(</span><span class="va">df</span>,</span> <span><span class="fu"><a href="reference/dumbbell.html">dumbbell</a></span><span class="op">(</span><span class="va">df</span>,</span>
<span> <span class="va">stat</span>,</span> <span> <span class="va">stat</span>,</span>
<span> <span class="va">setting</span>,</span> <span> <span class="va">setting</span>,</span>
<span> <span class="va">admin1</span>,</span> <span> <span class="va">admin1</span>,</span>
<span> title <span class="op">=</span> <span class="st">"% of HHs that reported open defecation as sanitation facility"</span>,</span> <span> title <span class="op">=</span> <span class="st">"% of HHs that reported open defecation as sanitation facility"</span>,</span>
<span> group_y_title <span class="op">=</span> <span class="st">"Admin 1"</span>,</span> <span> group_y_title <span class="op">=</span> <span class="st">"Admin 1"</span>,</span>
<span> group_x_title <span class="op">=</span> <span class="st">"Setting"</span>,</span>
<span> theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>legend_position <span class="op">=</span> <span class="st">"bottom"</span>,</span> <span> theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>legend_position <span class="op">=</span> <span class="st">"bottom"</span>,</span>
<span> legend_direction <span class="op">=</span> <span class="st">"horizontal"</span>,</span> <span> legend_direction <span class="op">=</span> <span class="st">"horizontal"</span>,</span>
<span> legend_title_font_face <span class="op">=</span> <span class="st">"bold"</span>,</span>
<span> palette <span class="op">=</span> <span class="st">"primary"</span>,</span> <span> palette <span class="op">=</span> <span class="st">"primary"</span>,</span>
<span> title_position_to_plot <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div> <span> title_position_to_plot <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<p><img src="reference/figures/README-example-dumbbell-plot-1.png" width="100%"></p> <span> legend.title.align <span class="op">=</span> <span class="fl">0.5</span><span class="op">)</span><span class="op">)</span> <span class="op">+</span></span>
<span> <span class="co"># Change legend title position (could be included as part of the function)</span></span>
<span> <span class="fu">ggplot2</span><span class="fu">::</span><span class="fu"><a href="https://ggplot2.tidyverse.org/reference/guides.html" class="external-link">guides</a></span><span class="op">(</span> </span>
<span> color <span class="op">=</span> <span class="fu">ggplot2</span><span class="fu">::</span><span class="fu"><a href="https://ggplot2.tidyverse.org/reference/guide_legend.html" class="external-link">guide_legend</a></span><span class="op">(</span>title.position <span class="op">=</span> <span class="st">"left"</span><span class="op">)</span>,</span>
<span> fill <span class="op">=</span> <span class="fu">ggplot2</span><span class="fu">::</span><span class="fu"><a href="https://ggplot2.tidyverse.org/reference/guide_legend.html" class="external-link">guide_legend</a></span><span class="op">(</span>title.position <span class="op">=</span> <span class="st">"left"</span><span class="op">)</span></span>
<span> <span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-dumbbell-plot-1.png" width="65%"></p>
</div>
<div class="section level3">
<h3 id="example-4-donut-chart-reach-themed-to-used-moderately">Example 4: donut chart, REACH themed (to used moderately)<a class="anchor" aria-label="anchor" href="#example-4-donut-chart-reach-themed-to-used-moderately"></a>
</h3>
<div class="sourceCode" id="cb10"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Some summarized data: % of HHs by displacement status</span></span>
<span><span class="va">df</span> <span class="op">&lt;-</span> <span class="fu">tibble</span><span class="fu">::</span><span class="fu"><a href="https://tibble.tidyverse.org/reference/tibble.html" class="external-link">tibble</a></span><span class="op">(</span></span>
<span> status <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Displaced"</span>, <span class="st">"Non displaced"</span>, <span class="st">"Returnee"</span>, <span class="st">"Don't know/Prefer not to say"</span><span class="op">)</span>,</span>
<span> percentage <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">18</span>, <span class="fl">65</span>, <span class="fl">12</span>, <span class="fl">3</span><span class="op">)</span></span>
<span><span class="op">)</span></span>
<span></span>
<span><span class="co"># Donut</span></span>
<span><span class="fu"><a href="reference/donut.html">donut</a></span><span class="op">(</span><span class="va">df</span>, </span>
<span> <span class="va">status</span>, </span>
<span> <span class="va">percentage</span>, </span>
<span> hole_size <span class="op">=</span> <span class="fl">3</span>, </span>
<span> add_text_suffix <span class="op">=</span> <span class="st">"%"</span>, </span>
<span> add_text_color <span class="op">=</span> <span class="fu"><a href="reference/cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"dk_grey"</span><span class="op">)</span>, </span>
<span> add_text_treshold_display <span class="op">=</span> <span class="fl">5</span>,</span>
<span> x_title <span class="op">=</span> <span class="st">"Displacement status"</span>, </span>
<span> title <span class="op">=</span> <span class="st">"% of HHs by displacement status"</span>, </span>
<span> theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>legend_reverse <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-donut-plot-1.png" width="65%"></p>
</div>
<div class="section level3">
<h3 id="example-5-alluvial-chart-reach-themed">Example 5: alluvial chart, REACH themed<a class="anchor" aria-label="anchor" href="#example-5-alluvial-chart-reach-themed"></a>
</h3>
<div class="sourceCode" id="cb11"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Some summarized data: % of HHs by self-reported status of displacement in 2021 and in 2022</span></span>
<span><span class="va">df</span> <span class="op">&lt;-</span> <span class="fu">tibble</span><span class="fu">::</span><span class="fu"><a href="https://tibble.tidyverse.org/reference/tibble.html" class="external-link">tibble</a></span><span class="op">(</span></span>
<span> status_from <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="st">"Displaced"</span>, <span class="fl">4</span><span class="op">)</span>,</span>
<span> <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="st">"Non displaced"</span>, <span class="fl">4</span><span class="op">)</span>,</span>
<span> <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="st">"Returnee"</span>, <span class="fl">4</span><span class="op">)</span>,</span>
<span> <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="st">"Dnk/Pnts"</span>, <span class="fl">4</span><span class="op">)</span><span class="op">)</span>,</span>
<span> status_to <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Displaced"</span>, <span class="st">"Non displaced"</span>, <span class="st">"Returnee"</span>, <span class="st">"Dnk/Pnts"</span>, <span class="st">"Displaced"</span>, <span class="st">"Non displaced"</span>, <span class="st">"Returnee"</span>, <span class="st">"Dnk/Pnts"</span>, <span class="st">"Displaced"</span>, <span class="st">"Non displaced"</span>, <span class="st">"Returnee"</span>, <span class="st">"Dnk/Pnts"</span>, <span class="st">"Displaced"</span>, <span class="st">"Non displaced"</span>, <span class="st">"Returnee"</span>, <span class="st">"Dnk/Pnts"</span><span class="op">)</span>,</span>
<span> percentage <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">20</span>, <span class="fl">8</span>, <span class="fl">18</span>, <span class="fl">1</span>, <span class="fl">12</span>, <span class="fl">21</span>, <span class="fl">0</span>, <span class="fl">2</span>, <span class="fl">0</span>, <span class="fl">3</span>, <span class="fl">12</span>, <span class="fl">1</span>, <span class="fl">0</span>, <span class="fl">0</span>, <span class="fl">1</span>, <span class="fl">1</span><span class="op">)</span></span>
<span><span class="op">)</span></span>
<span></span>
<span><span class="co"># Alluvial, here the group is the status for 2021</span></span>
<span></span>
<span><span class="fu"><a href="reference/alluvial.html">alluvial</a></span><span class="op">(</span><span class="va">df</span>, </span>
<span> <span class="va">status_from</span>, </span>
<span> <span class="va">status_to</span>,</span>
<span> <span class="va">percentage</span>, </span>
<span> <span class="va">status_from</span>,</span>
<span> from_levels <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Displaced"</span>, <span class="st">"Non displaced"</span>, <span class="st">"Returnee"</span>, <span class="st">"Dnk/Pnts"</span><span class="op">)</span>, </span>
<span> alpha <span class="op">=</span> <span class="fl">0.8</span>, </span>
<span> group_title <span class="op">=</span> <span class="st">"Status for 2021"</span>,</span>
<span> title <span class="op">=</span> <span class="st">"% of HHs by self-reported status from 2021 to 2022"</span>, </span>
<span> theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span></span>
<span> axis_y <span class="op">=</span> <span class="cn">FALSE</span>, </span>
<span> legend_position <span class="op">=</span> <span class="st">"none"</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-alluvial-plot-1.png" width="65%"></p>
</div>
<div class="section level3">
<h3 id="example-6-lollipop-chart">Example 6: lollipop chart<a class="anchor" aria-label="anchor" href="#example-6-lollipop-chart"></a>
</h3>
<div class="sourceCode" id="cb12"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://tidyr.tidyverse.org" class="external-link">tidyr</a></span><span class="op">)</span></span>
<span><span class="co"># Prepare long data</span></span>
<span><span class="va">df</span> <span class="op">&lt;-</span> <span class="fu">tibble</span><span class="fu">::</span><span class="fu"><a href="https://tibble.tidyverse.org/reference/tibble.html" class="external-link">tibble</a></span><span class="op">(</span></span>
<span> admin1 <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">replicate</a></span><span class="op">(</span><span class="fl">15</span>, <span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">letters</span>, <span class="fl">8</span><span class="op">)</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu"><a href="https://rdrr.io/r/base/t.html" class="external-link">t</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu"><a href="https://rdrr.io/r/base/as.data.frame.html" class="external-link">as.data.frame</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu"><a href="https://tidyr.tidyverse.org/reference/unite.html" class="external-link">unite</a></span><span class="op">(</span><span class="st">"admin1"</span>, sep <span class="op">=</span> <span class="st">""</span><span class="op">)</span> <span class="op">|&gt;</span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/pull.html" class="external-link">pull</a></span><span class="op">(</span><span class="va">admin1</span><span class="op">)</span>, </span>
<span> stat <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/stats/Normal.html" class="external-link">rnorm</a></span><span class="op">(</span><span class="fl">15</span>, mean <span class="op">=</span> <span class="fl">50</span>, sd <span class="op">=</span> <span class="fl">15</span><span class="op">)</span><span class="op">)</span> <span class="op">|&gt;</span></span>
<span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/mutate.html" class="external-link">mutate</a></span><span class="op">(</span>stat <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/Round.html" class="external-link">round</a></span><span class="op">(</span><span class="va">stat</span>, <span class="fl">0</span><span class="op">)</span><span class="op">)</span></span>
<span></span>
<span><span class="co"># Make lollipop plot, REACH themed, vertical with 45 degrees angle X-labels</span></span>
<span><span class="fu"><a href="reference/lollipop.html">lollipop</a></span><span class="op">(</span><span class="va">df</span>,</span>
<span> <span class="va">admin1</span>,</span>
<span> <span class="va">stat</span>,</span>
<span> arrange <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> add_text <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> flip <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> y_title <span class="op">=</span> <span class="st">"% of HHs"</span>,</span>
<span> x_title <span class="op">=</span> <span class="st">"Admin 1"</span>,</span>
<span> title <span class="op">=</span> <span class="st">"% of HHs that reported having received a humanitarian assistance"</span>,</span>
<span> theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>axis_text_x_angle <span class="op">=</span> <span class="fl">45</span>, </span>
<span> grid_major_y <span class="op">=</span> <span class="cn">TRUE</span>, </span>
<span> grid_major_y_size <span class="op">=</span> <span class="fl">0.2</span>, </span>
<span> grid_major_x <span class="op">=</span> <span class="cn">TRUE</span>, </span>
<span> grid_minor_y <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-lollipop-chart-1.png" width="65%"></p>
<div class="sourceCode" id="cb13"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Horizontal, greater point size, arranged by value, no grid, and text labels added</span></span>
<span><span class="fu"><a href="reference/lollipop.html">lollipop</a></span><span class="op">(</span><span class="va">df</span>,</span>
<span> <span class="va">admin1</span>,</span>
<span> <span class="va">stat</span>,</span>
<span> arrange <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> point_size <span class="op">=</span> <span class="fl">10</span>,</span>
<span> point_color <span class="op">=</span> <span class="fu"><a href="reference/cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_beige"</span><span class="op">)</span>,</span>
<span> segment_size <span class="op">=</span> <span class="fl">2</span>,</span>
<span> add_text <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> add_text_suffix <span class="op">=</span> <span class="st">"%"</span>,</span>
<span> y_title <span class="op">=</span> <span class="st">"% of HHs"</span>,</span>
<span> x_title <span class="op">=</span> <span class="st">"Admin 1"</span>,</span>
<span> title <span class="op">=</span> <span class="st">"% of HHs that reported having received a humanitarian assistance in the 12 months prior to the assessment"</span>,</span>
<span> theme <span class="op">=</span> <span class="fu"><a href="reference/theme_reach.html">theme_reach</a></span><span class="op">(</span>title_position_to_plot <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
<p><img src="reference/figures/README-example-lollipop-chart-2.png" width="65%"></p>
</div> </div>
</div> </div>
<div class="section level2"> <div class="section level2">
<h2 id="maps">Maps<a class="anchor" aria-label="anchor" href="#maps"></a> <h2 id="maps">Maps<a class="anchor" aria-label="anchor" href="#maps"></a>
</h2> </h2>
<div class="sourceCode" id="cb10"><pre class="downlit sourceCode r"> <div class="sourceCode" id="cb14"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="co"># Add indicator layer </span></span> <code class="sourceCode R"><span><span class="co"># Add indicator layer </span></span>
<span><span class="co"># - based on "pretty" classes and title "Proportion (%)" </span></span> <span><span class="co"># - based on "pretty" classes and title "Proportion (%)" </span></span>
<span><span class="co"># - buffer to add a 10% around the bounding box</span></span> <span><span class="co"># - buffer to add a 10% around the bounding box</span></span>

14
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@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -47,8 +47,18 @@
<div class="section level2"> <div class="section level2">
<h2 class="pkg-version" data-toc-text="0.6.9000" id="visualizer-069000">visualizeR 0.6.9000<a class="anchor" aria-label="anchor" href="#visualizer-069000"></a></h2> <h2 class="pkg-version" data-toc-text="0.6.9000" id="visualizer-069000">visualizeR 0.6.9000<a class="anchor" aria-label="anchor" href="#visualizer-069000"></a></h2>
<ul><li>Add <code><a href="../reference/dumbbell.html">dumbbell()</a></code>.</li> <ul><li>Add <code><a href="../reference/dumbbell.html">dumbbell()</a></code>.</li>
<li>Add further parameters to <code><a href="../reference/theme_reach.html">theme_reach()</a></code> <li>Add <code><a href="../reference/alluvial.html">alluvial()</a></code>
</li> </li>
<li>Add <code><a href="../reference/donut.html">donut()</a></code>
</li>
<li>Add <code><a href="../reference/lollipop.html">lollipop()</a></code>
</li>
<li>Add further parameters to <code><a href="../reference/theme_reach.html">theme_reach()</a></code>, including grid lines args.</li>
</ul><hr></div>
<div class="section level2">
<h2 class="pkg-version" data-toc-text="0.6.9000" id="visualizer-069000-1">visualizeR 0.6.9000<a class="anchor" aria-label="anchor" href="#visualizer-069000-1"></a></h2>
<ul><li>Add <code><a href="../reference/dumbbell.html">dumbbell()</a></code>.</li>
<li>Add further parameters to <code><a href="../reference/theme_reach.html">theme_reach()</a></code>.</li>
</ul><hr></div> </ul><hr></div>
<div class="section level2"> <div class="section level2">
<h2 class="pkg-version" data-toc-text="0.5.9000" id="visualizer-059000">visualizeR 0.5.9000<a class="anchor" aria-label="anchor" href="#visualizer-059000"></a></h2> <h2 class="pkg-version" data-toc-text="0.5.9000" id="visualizer-059000">visualizeR 0.5.9000<a class="anchor" aria-label="anchor" href="#visualizer-059000"></a></h2>

2
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@ -2,7 +2,7 @@ pandoc: 2.14.0.3
pkgdown: 2.0.7 pkgdown: 2.0.7
pkgdown_sha: ~ pkgdown_sha: ~
articles: {} articles: {}
last_built: 2022-12-24T23:19Z last_built: 2023-01-25T00:47Z
urls: urls:
reference: https://gnoblet.github.io/visualizeR/reference reference: https://gnoblet.github.io/visualizeR/reference
article: https://gnoblet.github.io/visualizeR/articles article: https://gnoblet.github.io/visualizeR/articles

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@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
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View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
docs/reference/add_admin_labels.html
View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
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View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
docs/reference/add_credits.html
View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
docs/reference/add_indicator_layer.html
View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
docs/reference/add_layout.html
View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

2
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View file

@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

166
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@ -0,0 +1,166 @@
<!DOCTYPE html>
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<img src="../logo.png" class="logo" alt=""><h1>Simple alluvial chart</h1>
<small class="dont-index">Source: <a href="https://github.com/gnoblet/visualizeR/blob/HEAD/R/alluvial.R" class="external-link"><code>R/alluvial.R</code></a></small>
<div class="d-none name"><code>alluvial.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Simple alluvial chart</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">alluvial</span><span class="op">(</span></span>
<span> <span class="va">df</span>,</span>
<span> <span class="va">from</span>,</span>
<span> <span class="va">to</span>,</span>
<span> <span class="va">value</span>,</span>
<span> group <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> alpha <span class="op">=</span> <span class="fl">0.5</span>,</span>
<span> from_levels <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> value_title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> group_title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> subtitle <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> caption <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> rect_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"white"</span><span class="op">)</span>,</span>
<span> rect_border_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_grey"</span><span class="op">)</span>,</span>
<span> rect_text_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_grey"</span><span class="op">)</span>,</span>
<span> theme <span class="op">=</span> <span class="fu"><a href="theme_reach.html">theme_reach</a></span><span class="op">(</span>axis_y <span class="op">=</span> <span class="cn">FALSE</span>, legend_position <span class="op">=</span> <span class="st">"none"</span><span class="op">)</span></span>
<span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>df</dt>
<dd><p>A data frame.</p></dd>
<dt>from</dt>
<dd><p>A character column of upstream stratum.</p></dd>
<dt>to</dt>
<dd><p>A character column of downstream stratum.</p></dd>
<dt>value</dt>
<dd><p>A numeric column of values.</p></dd>
<dt>group</dt>
<dd><p>The grouping column to fill the alluvium with.</p></dd>
<dt>alpha</dt>
<dd><p>Fill transparency. Default to 0.5.</p></dd>
<dt>from_levels</dt>
<dd><p>Order by given from levels?</p></dd>
<dt>value_title</dt>
<dd><p>The value/y scale title. Default to NULL.</p></dd>
<dt>group_title</dt>
<dd><p>The group title. Default to NULL.</p></dd>
<dt>title</dt>
<dd><p>Plot title. Default to NULL.</p></dd>
<dt>subtitle</dt>
<dd><p>Plot subtitle. Default to NULL.</p></dd>
<dt>caption</dt>
<dd><p>Plot caption. Default to NULL.</p></dd>
<dt>rect_color</dt>
<dd><p>Stratum rectangles' fill color.</p></dd>
<dt>rect_border_color</dt>
<dd><p>Stratum rectangles' border color.</p></dd>
<dt>rect_text_color</dt>
<dd><p>Stratum rectangles' text color.</p></dd>
<dt>theme</dt>
<dd><p>Whatever theme. Default to theme_reach().</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>A donut chart to be used parsimoniously</p>
</div>
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<img src="../logo.png" class="logo" alt=""><h1>Simple donut chart (to be used parsimoniously), can be a pie chart</h1>
<small class="dont-index">Source: <a href="https://github.com/gnoblet/visualizeR/blob/HEAD/R/donut.R" class="external-link"><code>R/donut.R</code></a></small>
<div class="d-none name"><code>donut.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Simple donut chart (to be used parsimoniously), can be a pie chart</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">donut</span><span class="op">(</span></span>
<span> <span class="va">df</span>,</span>
<span> <span class="va">x</span>,</span>
<span> <span class="va">y</span>,</span>
<span> alpha <span class="op">=</span> <span class="fl">1</span>,</span>
<span> x_title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> subtitle <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> caption <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> arrange <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> hole_size <span class="op">=</span> <span class="fl">3</span>,</span>
<span> add_text <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> add_text_treshold_display <span class="op">=</span> <span class="fl">5</span>,</span>
<span> add_text_color <span class="op">=</span> <span class="st">"white"</span>,</span>
<span> add_text_suffix <span class="op">=</span> <span class="st">""</span>,</span>
<span> theme <span class="op">=</span> <span class="fu"><a href="theme_reach.html">theme_reach</a></span><span class="op">(</span>legend_reverse <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span>
<span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>df</dt>
<dd><p>A data frame.</p></dd>
<dt>x</dt>
<dd><p>A character column or coercible as a character column. Will give the donut's fill color.</p></dd>
<dt>y</dt>
<dd><p>A numeric column.</p></dd>
<dt>alpha</dt>
<dd><p>Fill transparency.</p></dd>
<dt>x_title</dt>
<dd><p>The x scale title. Default to NULL.</p></dd>
<dt>title</dt>
<dd><p>Plot title. Default to NULL.</p></dd>
<dt>subtitle</dt>
<dd><p>Plot subtitle. Default to NULL.</p></dd>
<dt>caption</dt>
<dd><p>Plot caption. Default to NULL.</p></dd>
<dt>arrange</dt>
<dd><p>TRUE or FALSE. Arrange by highest percentage first.</p></dd>
<dt>hole_size</dt>
<dd><p>Hole size. Default to 3. If less than 2, back to a pie chart.</p></dd>
<dt>add_text</dt>
<dd><p>TRUE or FALSE. Add the value as text.</p></dd>
<dt>add_text_treshold_display</dt>
<dd><p>Minimum value to add the text label.</p></dd>
<dt>add_text_color</dt>
<dd><p>Text color.</p></dd>
<dt>add_text_suffix</dt>
<dd><p>If percent is FALSE, should we add a suffix to the text label?</p></dd>
<dt>theme</dt>
<dd><p>Whatever theme. Default to theme_reach().</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>A donut chart to be used parsimoniously</p>
</div>
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<dd>Add a scale bar</dd> <dd>Add a scale bar</dd>
</dl><dl><dt> </dl><dl><dt>
<code><a href="alluvial.html">alluvial()</a></code>
</dt>
<dd>Simple alluvial chart</dd>
</dl><dl><dt>
<code><a href="bar.html">bar()</a></code> <code><a href="bar.html">bar()</a></code>
</dt> </dt>
<dd>Simple bar chart</dd> <dd>Simple bar chart</dd>
@ -131,6 +136,11 @@
<dd>Function to extract REACH colors as hex codes</dd> <dd>Function to extract REACH colors as hex codes</dd>
</dl><dl><dt> </dl><dl><dt>
<code><a href="donut.html">donut()</a></code>
</dt>
<dd>Simple donut chart (to be used parsimoniously), can be a pie chart</dd>
</dl><dl><dt>
<code><a href="dumbbell.html">dumbbell()</a></code> <code><a href="dumbbell.html">dumbbell()</a></code>
</dt> </dt>
<dd>Make dumbbell chart.</dd> <dd>Make dumbbell chart.</dd>
@ -161,6 +171,11 @@
<dd>Haïti admin 1 lines shapefile.</dd> <dd>Haïti admin 1 lines shapefile.</dd>
</dl><dl><dt> </dl><dl><dt>
<code><a href="lollipop.html">lollipop()</a></code>
</dt>
<dd>Simple bar chart</dd>
</dl><dl><dt>
<code><a href="pal_agora.html">pal_agora()</a></code> <code><a href="pal_agora.html">pal_agora()</a></code>
</dt> </dt>
<dd>Return function to interpolate an AGORA color palette</dd> <dd>Return function to interpolate an AGORA color palette</dd>

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<img src="../logo.png" class="logo" alt=""><h1>Simple bar chart</h1>
<small class="dont-index">Source: <a href="https://github.com/gnoblet/visualizeR/blob/HEAD/R/lollipop.R" class="external-link"><code>R/lollipop.R</code></a></small>
<div class="d-none name"><code>lollipop.Rd</code></div>
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<div class="ref-description section level2">
<p>Simple bar chart</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">lollipop</span><span class="op">(</span></span>
<span> <span class="va">df</span>,</span>
<span> <span class="va">x</span>,</span>
<span> <span class="va">y</span>,</span>
<span> flip <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> wrap <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> arrange <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> point_size <span class="op">=</span> <span class="fl">3</span>,</span>
<span> point_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_red"</span><span class="op">)</span>,</span>
<span> point_alpha <span class="op">=</span> <span class="fl">1</span>,</span>
<span> segment_size <span class="op">=</span> <span class="fl">1</span>,</span>
<span> segment_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_grey"</span><span class="op">)</span>,</span>
<span> segment_alpha <span class="op">=</span> <span class="fl">1</span>,</span>
<span> alpha <span class="op">=</span> <span class="fl">1</span>,</span>
<span> x_title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> y_title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> title <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> subtitle <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> caption <span class="op">=</span> <span class="cn">NULL</span>,</span>
<span> add_text <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> add_text_size <span class="op">=</span> <span class="fl">3</span>,</span>
<span> add_text_suffix <span class="op">=</span> <span class="st">""</span>,</span>
<span> add_text_color <span class="op">=</span> <span class="st">"white"</span>,</span>
<span> add_text_fontface <span class="op">=</span> <span class="st">"bold"</span>,</span>
<span> theme <span class="op">=</span> <span class="fu"><a href="theme_reach.html">theme_reach</a></span><span class="op">(</span><span class="op">)</span></span>
<span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt>df</dt>
<dd><p>A data frame.</p></dd>
<dt>x</dt>
<dd><p>A numeric column.</p></dd>
<dt>y</dt>
<dd><p>A character column or coercible as a character column.</p></dd>
<dt>flip</dt>
<dd><p>TRUE or FALSE. Default to TRUE or horizontal lollipop plot.</p></dd>
<dt>wrap</dt>
<dd><p>Should x-labels be wrapped? Number of characters.</p></dd>
<dt>arrange</dt>
<dd><p>TRUE or FALSE. Arrange by highest percentage first.</p></dd>
<dt>point_size</dt>
<dd><p>Point size.</p></dd>
<dt>point_color</dt>
<dd><p>Point color.</p></dd>
<dt>point_alpha</dt>
<dd><p>Point alpha.</p></dd>
<dt>segment_size</dt>
<dd><p>Segment size.</p></dd>
<dt>segment_color</dt>
<dd><p>Segment color.</p></dd>
<dt>segment_alpha</dt>
<dd><p>Segment alpha.</p></dd>
<dt>alpha</dt>
<dd><p>Fill transparency.</p></dd>
<dt>x_title</dt>
<dd><p>The x scale title. Default to NULL.</p></dd>
<dt>y_title</dt>
<dd><p>The y scale title. Default to NULL.</p></dd>
<dt>title</dt>
<dd><p>Plot title. Default to NULL.</p></dd>
<dt>subtitle</dt>
<dd><p>Plot subtitle. Default to NULL.</p></dd>
<dt>caption</dt>
<dd><p>Plot caption. Default to NULL.</p></dd>
<dt>add_text</dt>
<dd><p>TRUE or FALSE. Add the y value as text within the bubble.</p></dd>
<dt>add_text_size</dt>
<dd><p>Text size.</p></dd>
<dt>add_text_suffix</dt>
<dd><p>If percent is FALSE, should we add a suffix to the text label?</p></dd>
<dt>add_text_color</dt>
<dd><p>Added text color. Default to white.</p></dd>
<dt>add_text_fontface</dt>
<dd><p>Added text font face. Default to "bold".</p></dd>
<dt>theme</dt>
<dd><p>Whatever theme. Default to theme_reach().</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>A bar chart</p>
</div>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">

70
docs/reference/theme_reach.html
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@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">visualizeR</a> <a class="navbar-brand me-2" href="../index.html">visualizeR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.9000</small> <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.7.9000</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -55,7 +55,7 @@
<span> palette <span class="op">=</span> <span class="st">"main"</span>,</span> <span> palette <span class="op">=</span> <span class="st">"main"</span>,</span>
<span> discrete <span class="op">=</span> <span class="cn">TRUE</span>,</span> <span> discrete <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> reverse <span class="op">=</span> <span class="cn">FALSE</span>,</span> <span> reverse <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> font_family <span class="op">=</span> <span class="st">"Leelawadee"</span>,</span> <span> font_family <span class="op">=</span> <span class="st">"Segoe UI"</span>,</span>
<span> title_size <span class="op">=</span> <span class="fl">12</span>,</span> <span> title_size <span class="op">=</span> <span class="fl">12</span>,</span>
<span> title_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_grey"</span><span class="op">)</span>,</span> <span> title_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_grey"</span><span class="op">)</span>,</span>
<span> title_font_face <span class="op">=</span> <span class="st">"bold"</span>,</span> <span> title_font_face <span class="op">=</span> <span class="st">"bold"</span>,</span>
@ -81,11 +81,19 @@
<span> axis_title_size <span class="op">=</span> <span class="fl">11</span>,</span> <span> axis_title_size <span class="op">=</span> <span class="fl">11</span>,</span>
<span> axis_title_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_grey"</span><span class="op">)</span>,</span> <span> axis_title_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_grey"</span><span class="op">)</span>,</span>
<span> axis_title_font_face <span class="op">=</span> <span class="st">"bold"</span>,</span> <span> axis_title_font_face <span class="op">=</span> <span class="st">"bold"</span>,</span>
<span> grid_x <span class="op">=</span> <span class="cn">FALSE</span>,</span> <span> axis_text_x_angle <span class="op">=</span> <span class="fl">0</span>,</span>
<span> grid_y <span class="op">=</span> <span class="cn">FALSE</span>,</span> <span> axis_text_x_vjust <span class="op">=</span> <span class="fl">0.5</span>,</span>
<span> grid_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_lt_grey"</span><span class="op">)</span>,</span> <span> axis_text_x_hjust <span class="op">=</span> <span class="fl">0.5</span>,</span>
<span> grid_x_size <span class="op">=</span> <span class="fl">0.1</span>,</span> <span> grid_major_x <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> grid_y_size <span class="op">=</span> <span class="fl">0.1</span>,</span> <span> grid_major_y <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> grid_major_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_lt_grey"</span><span class="op">)</span>,</span>
<span> grid_major_x_size <span class="op">=</span> <span class="fl">0.1</span>,</span>
<span> grid_major_y_size <span class="op">=</span> <span class="fl">0.1</span>,</span>
<span> grid_minor_x <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> grid_minor_y <span class="op">=</span> <span class="cn">FALSE</span>,</span>
<span> grid_minor_color <span class="op">=</span> <span class="fu"><a href="cols_reach.html">cols_reach</a></span><span class="op">(</span><span class="st">"main_lt_grey"</span><span class="op">)</span>,</span>
<span> grid_minor_x_size <span class="op">=</span> <span class="fl">0.05</span>,</span>
<span> grid_minor_y_size <span class="op">=</span> <span class="fl">0.05</span>,</span>
<span> caption_position_to_plot <span class="op">=</span> <span class="cn">TRUE</span>,</span> <span> caption_position_to_plot <span class="op">=</span> <span class="cn">TRUE</span>,</span>
<span> <span class="va">...</span></span> <span> <span class="va">...</span></span>
<span><span class="op">)</span></span></code></pre></div> <span><span class="op">)</span></span></code></pre></div>
@ -209,24 +217,56 @@
<dd><p>Axis title font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic").</p></dd> <dd><p>Axis title font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic").</p></dd>
<dt>grid_x</dt> <dt>axis_text_x_angle</dt>
<dd><p>Angle for the x-axis text.</p></dd>
<dt>axis_text_x_vjust</dt>
<dd><p>Vertical adjustment for the x-axis text.</p></dd>
<dt>axis_text_x_hjust</dt>
<dd><p>Vertical adjustment for the x-axis text.</p></dd>
<dt>grid_major_x</dt>
<dd><p>Boolean. Do you need major grid lines for x-axis?</p></dd> <dd><p>Boolean. Do you need major grid lines for x-axis?</p></dd>
<dt>grid_y</dt> <dt>grid_major_y</dt>
<dd><p>Boolean. Do you need major grid lines for y-axis?</p></dd> <dd><p>Boolean. Do you need major grid lines for y-axis?</p></dd>
<dt>grid_color</dt> <dt>grid_major_color</dt>
<dd><p>Grid lines color.</p></dd> <dd><p>Major grid lines color.</p></dd>
<dt>grid_x_size</dt> <dt>grid_major_x_size</dt>
<dd><p>X line size.</p></dd> <dd><p>Major X line size.</p></dd>
<dt>grid_y_size</dt> <dt>grid_major_y_size</dt>
<dd><p>Y line size.</p></dd> <dd><p>Major Y line size.</p></dd>
<dt>grid_minor_x</dt>
<dd><p>Boolean. Do you need minor grid lines for x-axis?</p></dd>
<dt>grid_minor_y</dt>
<dd><p>Boolean. Do you need minor grid lines for y-axis?</p></dd>
<dt>grid_minor_color</dt>
<dd><p>Minor grid lines color.</p></dd>
<dt>grid_minor_x_size</dt>
<dd><p>Minor X line size.</p></dd>
<dt>grid_minor_y_size</dt>
<dd><p>Minor Y line size.</p></dd>
<dt>caption_position_to_plot</dt> <dt>caption_position_to_plot</dt>

2
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9
docs/sitemap.xml
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@ -39,6 +39,9 @@
<url> <url>
<loc>https://gnoblet.github.io/visualizeR/reference/add_scale_bar.html</loc> <loc>https://gnoblet.github.io/visualizeR/reference/add_scale_bar.html</loc>
</url> </url>
<url>
<loc>https://gnoblet.github.io/visualizeR/reference/alluvial.html</loc>
</url>
<url> <url>
<loc>https://gnoblet.github.io/visualizeR/reference/bar.html</loc> <loc>https://gnoblet.github.io/visualizeR/reference/bar.html</loc>
</url> </url>
@ -60,6 +63,9 @@
<url> <url>
<loc>https://gnoblet.github.io/visualizeR/reference/cols_reach.html</loc> <loc>https://gnoblet.github.io/visualizeR/reference/cols_reach.html</loc>
</url> </url>
<url>
<loc>https://gnoblet.github.io/visualizeR/reference/donut.html</loc>
</url>
<url> <url>
<loc>https://gnoblet.github.io/visualizeR/reference/dumbbell.html</loc> <loc>https://gnoblet.github.io/visualizeR/reference/dumbbell.html</loc>
</url> </url>
@ -81,6 +87,9 @@
<url> <url>
<loc>https://gnoblet.github.io/visualizeR/reference/line_admin1.html</loc> <loc>https://gnoblet.github.io/visualizeR/reference/line_admin1.html</loc>
</url> </url>
<url>
<loc>https://gnoblet.github.io/visualizeR/reference/lollipop.html</loc>
</url>
<url> <url>
<loc>https://gnoblet.github.io/visualizeR/reference/pal_agora.html</loc> <loc>https://gnoblet.github.io/visualizeR/reference/pal_agora.html</loc>
</url> </url>

64
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@ -0,0 +1,64 @@
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/alluvial.R
\name{alluvial}
\alias{alluvial}
\title{Simple alluvial chart}
\usage{
alluvial(
df,
from,
to,
value,
group = NULL,
alpha = 0.5,
from_levels = NULL,
value_title = NULL,
group_title = NULL,
title = NULL,
subtitle = NULL,
caption = NULL,
rect_color = cols_reach("white"),
rect_border_color = cols_reach("main_grey"),
rect_text_color = cols_reach("main_grey"),
theme = theme_reach(axis_y = FALSE, legend_position = "none")
)
}
\arguments{
\item{df}{A data frame.}
\item{from}{A character column of upstream stratum.}
\item{to}{A character column of downstream stratum.}
\item{value}{A numeric column of values.}
\item{group}{The grouping column to fill the alluvium with.}
\item{alpha}{Fill transparency. Default to 0.5.}
\item{from_levels}{Order by given from levels?}
\item{value_title}{The value/y scale title. Default to NULL.}
\item{group_title}{The group title. Default to NULL.}
\item{title}{Plot title. Default to NULL.}
\item{subtitle}{Plot subtitle. Default to NULL.}
\item{caption}{Plot caption. Default to NULL.}
\item{rect_color}{Stratum rectangles' fill color.}
\item{rect_border_color}{Stratum rectangles' border color.}
\item{rect_text_color}{Stratum rectangles' text color.}
\item{theme}{Whatever theme. Default to theme_reach().}
}
\value{
A donut chart to be used parsimoniously
}
\description{
Simple alluvial chart
}

61
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@ -0,0 +1,61 @@
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/donut.R
\name{donut}
\alias{donut}
\title{Simple donut chart (to be used parsimoniously), can be a pie chart}
\usage{
donut(
df,
x,
y,
alpha = 1,
x_title = NULL,
title = NULL,
subtitle = NULL,
caption = NULL,
arrange = TRUE,
hole_size = 3,
add_text = TRUE,
add_text_treshold_display = 5,
add_text_color = "white",
add_text_suffix = "",
theme = theme_reach(legend_reverse = TRUE)
)
}
\arguments{
\item{df}{A data frame.}
\item{x}{A character column or coercible as a character column. Will give the donut's fill color.}
\item{y}{A numeric column.}
\item{alpha}{Fill transparency.}
\item{x_title}{The x scale title. Default to NULL.}
\item{title}{Plot title. Default to NULL.}
\item{subtitle}{Plot subtitle. Default to NULL.}
\item{caption}{Plot caption. Default to NULL.}
\item{arrange}{TRUE or FALSE. Arrange by highest percentage first.}
\item{hole_size}{Hole size. Default to 3. If less than 2, back to a pie chart.}
\item{add_text}{TRUE or FALSE. Add the value as text.}
\item{add_text_treshold_display}{Minimum value to add the text label.}
\item{add_text_color}{Text color.}
\item{add_text_suffix}{If percent is FALSE, should we add a suffix to the text label?}
\item{theme}{Whatever theme. Default to theme_reach().}
}
\value{
A donut chart to be used parsimoniously
}
\description{
Simple donut chart (to be used parsimoniously), can be a pie chart
}

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@ -0,0 +1,88 @@
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/lollipop.R
\name{lollipop}
\alias{lollipop}
\title{Simple bar chart}
\usage{
lollipop(
df,
x,
y,
flip = TRUE,
wrap = NULL,
arrange = TRUE,
point_size = 3,
point_color = cols_reach("main_red"),
point_alpha = 1,
segment_size = 1,
segment_color = cols_reach("main_grey"),
segment_alpha = 1,
alpha = 1,
x_title = NULL,
y_title = NULL,
title = NULL,
subtitle = NULL,
caption = NULL,
add_text = FALSE,
add_text_size = 3,
add_text_suffix = "",
add_text_color = "white",
add_text_fontface = "bold",
theme = theme_reach()
)
}
\arguments{
\item{df}{A data frame.}
\item{x}{A numeric column.}
\item{y}{A character column or coercible as a character column.}
\item{flip}{TRUE or FALSE. Default to TRUE or horizontal lollipop plot.}
\item{wrap}{Should x-labels be wrapped? Number of characters.}
\item{arrange}{TRUE or FALSE. Arrange by highest percentage first.}
\item{point_size}{Point size.}
\item{point_color}{Point color.}
\item{point_alpha}{Point alpha.}
\item{segment_size}{Segment size.}
\item{segment_color}{Segment color.}
\item{segment_alpha}{Segment alpha.}
\item{alpha}{Fill transparency.}
\item{x_title}{The x scale title. Default to NULL.}
\item{y_title}{The y scale title. Default to NULL.}
\item{title}{Plot title. Default to NULL.}
\item{subtitle}{Plot subtitle. Default to NULL.}
\item{caption}{Plot caption. Default to NULL.}
\item{add_text}{TRUE or FALSE. Add the y value as text within the bubble.}
\item{add_text_size}{Text size.}
\item{add_text_suffix}{If percent is FALSE, should we add a suffix to the text label?}
\item{add_text_color}{Added text color. Default to white.}
\item{add_text_fontface}{Added text font face. Default to "bold".}
\item{theme}{Whatever theme. Default to theme_reach().}
}
\value{
A bar chart
}
\description{
Simple bar chart
}

46
man/theme_reach.Rd
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@ -8,7 +8,7 @@ theme_reach(
palette = "main", palette = "main",
discrete = TRUE, discrete = TRUE,
reverse = FALSE, reverse = FALSE,
font_family = "Leelawadee", font_family = "Segoe UI",
title_size = 12, title_size = 12,
title_color = cols_reach("main_grey"), title_color = cols_reach("main_grey"),
title_font_face = "bold", title_font_face = "bold",
@ -34,11 +34,19 @@ theme_reach(
axis_title_size = 11, axis_title_size = 11,
axis_title_color = cols_reach("main_grey"), axis_title_color = cols_reach("main_grey"),
axis_title_font_face = "bold", axis_title_font_face = "bold",
grid_x = FALSE, axis_text_x_angle = 0,
grid_y = FALSE, axis_text_x_vjust = 0.5,
grid_color = cols_reach("main_lt_grey"), axis_text_x_hjust = 0.5,
grid_x_size = 0.1, grid_major_x = FALSE,
grid_y_size = 0.1, grid_major_y = FALSE,
grid_major_color = cols_reach("main_lt_grey"),
grid_major_x_size = 0.1,
grid_major_y_size = 0.1,
grid_minor_x = FALSE,
grid_minor_y = FALSE,
grid_minor_color = cols_reach("main_lt_grey"),
grid_minor_x_size = 0.05,
grid_minor_y_size = 0.05,
caption_position_to_plot = TRUE, caption_position_to_plot = TRUE,
... ...
) )
@ -102,15 +110,31 @@ theme_reach(
\item{axis_title_font_face}{Axis title font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic").} \item{axis_title_font_face}{Axis title font face. Default to "plain". Font face ("plain", "italic", "bold", "bold.italic").}
\item{grid_x}{Boolean. Do you need major grid lines for x-axis?} \item{axis_text_x_angle}{Angle for the x-axis text.}
\item{grid_y}{Boolean. Do you need major grid lines for y-axis?} \item{axis_text_x_vjust}{Vertical adjustment for the x-axis text.}
\item{grid_color}{Grid lines color.} \item{axis_text_x_hjust}{Vertical adjustment for the x-axis text.}
\item{grid_x_size}{X line size.} \item{grid_major_x}{Boolean. Do you need major grid lines for x-axis?}
\item{grid_y_size}{Y line size.} \item{grid_major_y}{Boolean. Do you need major grid lines for y-axis?}
\item{grid_major_color}{Major grid lines color.}
\item{grid_major_x_size}{Major X line size.}
\item{grid_major_y_size}{Major Y line size.}
\item{grid_minor_x}{Boolean. Do you need minor grid lines for x-axis?}
\item{grid_minor_y}{Boolean. Do you need minor grid lines for y-axis?}
\item{grid_minor_color}{Minor grid lines color.}
\item{grid_minor_x_size}{Minor X line size.}
\item{grid_minor_y_size}{Minor Y line size.}
\item{caption_position_to_plot}{TRUE or FALSE. Positioning to plot or to panel?} \item{caption_position_to_plot}{TRUE or FALSE. Positioning to plot or to panel?}