From 9c569b86bb5cf253e8552c15d25c4474b2d3497f Mon Sep 17 00:00:00 2001 From: gnoblet Date: Sun, 1 May 2022 11:36:23 +0200 Subject: [PATCH] Initial commit --- .Rbuildignore | 8 + .gitignore | 6 + DESCRIPTION | 23 ++ LICENSE.md | 595 +++++++++++++++++++++++++++++++++++ NAMESPACE | 1 + NEWS.md | 4 + R/cols_agora.R | 32 ++ R/cols_reach.R | 69 ++++ R/pal_agora.R | 40 +++ R/pal_reach.R | 40 +++ R/scale.R | 77 +++++ R/theme_reach.R | 91 ++++++ README.Rmd | 55 ++++ _pkgdown.yml | 4 + man/cols_agora.Rd | 22 ++ man/cols_reach.Rd | 22 ++ man/pal_agora.Rd | 31 ++ man/pal_reach.Rd | 31 ++ man/scale_color.Rd | 44 +++ man/theme_reach.Rd | 17 + man/theme_reach_borders.Rd | 17 + man/theme_reach_flip_hist.Rd | 17 + man/theme_reach_hist.Rd | 17 + visualizeR.Rproj | 20 ++ 24 files changed, 1283 insertions(+) create mode 100644 .Rbuildignore create mode 100644 .gitignore create mode 100644 DESCRIPTION create mode 100644 LICENSE.md create mode 100644 NAMESPACE create mode 100644 NEWS.md create mode 100644 R/cols_agora.R create mode 100644 R/cols_reach.R create mode 100644 R/pal_agora.R create mode 100644 R/pal_reach.R create mode 100644 R/scale.R create mode 100644 R/theme_reach.R create mode 100644 README.Rmd create mode 100644 _pkgdown.yml create mode 100644 man/cols_agora.Rd create mode 100644 man/cols_reach.Rd create mode 100644 man/pal_agora.Rd create mode 100644 man/pal_reach.Rd create mode 100644 man/scale_color.Rd create mode 100644 man/theme_reach.Rd create mode 100644 man/theme_reach_borders.Rd create mode 100644 man/theme_reach_flip_hist.Rd create mode 100644 man/theme_reach_hist.Rd create mode 100644 visualizeR.Rproj diff --git a/.Rbuildignore b/.Rbuildignore new file mode 100644 index 0000000..311b91e --- /dev/null +++ b/.Rbuildignore @@ -0,0 +1,8 @@ +^.*\.Rproj$ +^\.Rproj\.user$ +^LICENSE\.md$ +^README\.Rmd +^docs +^_pkgdown\.yml$ +^docs$ +^pkgdown$ diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..4720eff --- /dev/null +++ b/.gitignore @@ -0,0 +1,6 @@ +docs +.Rproj.user +.Rhistory +.Rdata +.httr-oauth +.DS_Store diff --git a/DESCRIPTION b/DESCRIPTION new file mode 100644 index 0000000..cb9e84b --- /dev/null +++ b/DESCRIPTION @@ -0,0 +1,23 @@ +Package: visualizeR +Type: Package +Title: What a color! What a viz! +Version: 0.1.0 +Authors@R: c( + person( + 'Noblet', 'Guillaume', + email = 'gnoblet@zaclys.net', + role = c('aut', 'cre') + ) + ) +URL: https://github.com/gnoblet/visualizeR, + https://gnoblet.github.io/visualizeR/ +Maintainer: Guillaume Noblet +Description: It basically provides colors as hex codes, color palettes, and some viz functions (graphs and maps). +Depends: R (>= 4.1.0) +License: GPL (>= 3) +Encoding: UTF-8 +LazyData: true +RoxygenNote: 7.1.2 +Imports: ggplot2, rlang, grDevices, simplevis +Suggests: knitr +VignetteBuilder: knitr diff --git a/LICENSE.md b/LICENSE.md new file mode 100644 index 0000000..175443c --- /dev/null +++ b/LICENSE.md @@ -0,0 +1,595 @@ +GNU General Public License +========================== + +_Version 3, 29 June 2007_ +_Copyright © 2007 Free Software Foundation, Inc. <>_ + +Everyone is permitted to copy and distribute verbatim copies of this license +document, but changing it is not allowed. + +## Preamble + +The GNU General Public License is a free, copyleft license for software and other +kinds of works. + +The licenses for most software and other practical works are designed to take away +your freedom to share and change the works. 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Additional Terms + +“Additional permissions” are terms that supplement the terms of this +License by making exceptions from one or more of its conditions. Additional +permissions that are applicable to the entire Program shall be treated as though they +were included in this License, to the extent that they are valid under applicable +law. If additional permissions apply only to part of the Program, that part may be +used separately under those permissions, but the entire Program remains governed by +this License without regard to the additional permissions. + +When you convey a copy of a covered work, you may at your option remove any +additional permissions from that copy, or from any part of it. (Additional +permissions may be written to require their own removal in certain cases when you +modify the work.) 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If the Program as you received +it, or any part of it, contains a notice stating that it is governed by this License +along with a term that is a further restriction, you may remove that term. If a +license document contains a further restriction but permits relicensing or conveying +under this License, you may add to a covered work material governed by the terms of +that license document, provided that the further restriction does not survive such +relicensing or conveying. + +If you add terms to a covered work in accord with this section, you must place, in +the relevant source files, a statement of the additional terms that apply to those +files, or a notice indicating where to find the applicable terms. + +Additional terms, permissive or non-permissive, may be stated in the form of a +separately written license, or stated as exceptions; the above requirements apply +either way. + +### 8. Termination + +You may not propagate or modify a covered work except as expressly provided under +this License. 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You may not convey a covered work if you are a party to an arrangement with +a third party that is in the business of distributing software, under which you make +payment to the third party based on the extent of your activity of conveying the +work, and under which the third party grants, to any of the parties who would receive +the covered work from you, a discriminatory patent license **(a)** in connection with +copies of the covered work conveyed by you (or copies made from those copies), or **(b)** +primarily for and in connection with specific products or compilations that contain +the covered work, unless you entered into that arrangement, or that patent license +was granted, prior to 28 March 2007. + +Nothing in this License shall be construed as excluding or limiting any implied +license or other defenses to infringement that may otherwise be available to you +under applicable patent law. + +### 12. No Surrender of Others' Freedom + +If conditions are imposed on you (whether by court order, agreement or otherwise) +that contradict the conditions of this License, they do not excuse you from the +conditions of this License. If you cannot convey a covered work so as to satisfy +simultaneously your obligations under this License and any other pertinent +obligations, then as a consequence you may not convey it at all. For example, if you +agree to terms that obligate you to collect a royalty for further conveying from +those to whom you convey the Program, the only way you could satisfy both those terms +and this License would be to refrain entirely from conveying the Program. + +### 13. Use with the GNU Affero General Public License + +Notwithstanding any other provision of this License, you have permission to link or +combine any covered work with a work licensed under version 3 of the GNU Affero +General Public License into a single combined work, and to convey the resulting work. +The terms of this License will continue to apply to the part which is the covered +work, but the special requirements of the GNU Affero General Public License, section +13, concerning interaction through a network will apply to the combination as such. + +### 14. Revised Versions of this License + +The Free Software Foundation may publish revised and/or new versions of the GNU +General Public License from time to time. Such new versions will be similar in spirit +to the present version, but may differ in detail to address new problems or concerns. + +Each version is given a distinguishing version number. If the Program specifies that +a certain numbered version of the GNU General Public License “or any later +version” applies to it, you have the option of following the terms and +conditions either of that numbered version or of any later version published by the +Free Software Foundation. If the Program does not specify a version number of the GNU +General Public License, you may choose any version ever published by the Free +Software Foundation. + +If the Program specifies that a proxy can decide which future versions of the GNU +General Public License can be used, that proxy's public statement of acceptance of a +version permanently authorizes you to choose that version for the Program. + +Later license versions may give you additional or different permissions. However, no +additional obligations are imposed on any author or copyright holder as a result of +your choosing to follow a later version. + +### 15. Disclaimer of Warranty + +THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. +EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES +PROVIDE THE PROGRAM “AS IS” WITHOUT WARRANTY OF ANY KIND, EITHER +EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF +MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE +QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE +DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION. + +### 16. Limitation of Liability + +IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY +COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS THE PROGRAM AS +PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY GENERAL, SPECIAL, +INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OR INABILITY TO USE THE +PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE +OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE +WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE +POSSIBILITY OF SUCH DAMAGES. + +### 17. Interpretation of Sections 15 and 16 + +If the disclaimer of warranty and limitation of liability provided above cannot be +given local legal effect according to their terms, reviewing courts shall apply local +law that most closely approximates an absolute waiver of all civil liability in +connection with the Program, unless a warranty or assumption of liability accompanies +a copy of the Program in return for a fee. + +_END OF TERMS AND CONDITIONS_ + +## How to Apply These Terms to Your New Programs + +If you develop a new program, and you want it to be of the greatest possible use to +the public, the best way to achieve this is to make it free software which everyone +can redistribute and change under these terms. + +To do so, attach the following notices to the program. It is safest to attach them +to the start of each source file to most effectively state the exclusion of warranty; +and each file should have at least the “copyright” line and a pointer to +where the full notice is found. + + + Copyright (C) + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see . + +Also add information on how to contact you by electronic and paper mail. + +If the program does terminal interaction, make it output a short notice like this +when it starts in an interactive mode: + + Copyright (C) + This program comes with ABSOLUTELY NO WARRANTY; for details type 'show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type 'show c' for details. + +The hypothetical commands `show w` and `show c` should show the appropriate parts of +the General Public License. Of course, your program's commands might be different; +for a GUI interface, you would use an “about box”. + +You should also get your employer (if you work as a programmer) or school, if any, to +sign a “copyright disclaimer” for the program, if necessary. For more +information on this, and how to apply and follow the GNU GPL, see +<>. + +The GNU General Public License does not permit incorporating your program into +proprietary programs. If your program is a subroutine library, you may consider it +more useful to permit linking proprietary applications with the library. If this is +what you want to do, use the GNU Lesser General Public License instead of this +License. But first, please read +<>. diff --git a/NAMESPACE b/NAMESPACE new file mode 100644 index 0000000..40ea8e2 --- /dev/null +++ b/NAMESPACE @@ -0,0 +1 @@ +exportPattern("^[[:alpha:]]+") diff --git a/NEWS.md b/NEWS.md new file mode 100644 index 0000000..c11824a --- /dev/null +++ b/NEWS.md @@ -0,0 +1,4 @@ +# visualizeR 0.1.0 + +* Added a `NEWS.md` file to track changes to the package. +* Initiate repo diff --git a/R/cols_agora.R b/R/cols_agora.R new file mode 100644 index 0000000..5b2333f --- /dev/null +++ b/R/cols_agora.R @@ -0,0 +1,32 @@ +#' @title Function to extract AGORA colors as hex codes +#' +#' @param ... Character names of reach colors. If NULL returns all colors +#' @param unnamed Should the output vector be unnamed? Default to `TRUE` +#' +#' @return An hex code or hex codes named or unnamed +#' +#' @details This function needs to be modified to add colors +#' +#' @export +cols_agora <- function(..., unnamed = TRUE) { + cols <- c(...) + + colors_agora <- c(white = "#FFFFFF", + black = "#000000", + main_bordeaux = "#581522", + main_lt_beige = "#DDD8C4", + main_dk_beige = "#B7AD99", + main_lt_grey = "#BCB8B1") + + if (is.null(cols)) { + cols_to_return <- colors_agora + } else { + cols_to_return <- colors_agora[cols] + } + + if(unnamed){ + cols_to_return <- unname(cols_to_return) + } + + return(cols_to_return) +} diff --git a/R/cols_reach.R b/R/cols_reach.R new file mode 100644 index 0000000..317948d --- /dev/null +++ b/R/cols_reach.R @@ -0,0 +1,69 @@ +#' @title Function to extract REACH colors as hex codes +#' +#' @param ... Character names of reach colors. If NULL returns all colors +#' @param unnamed Should the output vector be unnamed? Default to `TRUE` +#' +#' @return An hex code or hex codes named or unnamed +#' +#' @details This function needs to be modified to add colors +#' +#' @export +cols_reach <- function(..., unnamed = TRUE) { + cols <- c(...) + + colors_reach <- c(white = "#FFFFFF", + black = "#000000", + main_grey = "#58585A", + main_red = "#EE5859", + main_lt_grey = "#C7C8CA", + main_beige = "#D2CBB8", + iroise_1 = "#DFECEF", + iroise_2 = "#B1D7E0", + iroise_3 = "#699DA3", + iroise_4 = "#236A7A", + iroise_5 = "#0C3842", + red_main_1 = "#AE2829", + red_main_2 = "#D05E5F", + red_main_3 = "#DB9797", + red_main_4 = "#EBC7C8", + red_main_5 = "#FAF2F2", + red_alt_1 = "#792a2e", + red_alt_2 = "#c0474a", + red_alt_3 = "#ee5859", + red_alt_4 = "#f49695", + red_alt_5 = "#f8d6d6", + red_alt_na = "#f8f4f4", + lt_grey_1 = "#C6C6C6", + lt_grey_2 = "#818183", + grey3 = "#E3E3E3", + dk_grey = "#464647", + two_dots_1 = "#706441", + two_dots_2 = "#56b4e9", + two_dots_flashy_1 = "gold1", + two_dots_flashy_2 = "blue2", + three_dots_1 = "aquamarine2", + three_dots_2 = "cornflowerbluer", + three_dots_3 = "brown1", + orpink = "#f8aa9b", + pink = "#f5a6a7", + lt_pink = "#F9C6C7", + hot_pink = "#ef6d6f", + mddk_red = "#bf4749", + dk_red = "#782c2e", + orange = "#F69E61", + lt_green = "#B0CFAC", + green = "#84A181", + dk_green = "#526450") + + if (is.null(cols)) { + cols_to_return <- colors_reach + } else { + cols_to_return <- colors_reach[cols] + } + + if(unnamed){ + cols_to_return <- unname(cols_to_return) + } + + return(cols_to_return) +} diff --git a/R/pal_agora.R b/R/pal_agora.R new file mode 100644 index 0000000..90f08a6 --- /dev/null +++ b/R/pal_agora.R @@ -0,0 +1,40 @@ +#' @title Return function to interpolate an AGORA color palette +#' +#' @param palette Character name of a palette in AGORA palettes +#' @param reverse Boolean indicating whether the palette should be reversed +#' @param color_ramp_palette Should the output be a `grDevices::colorRampPalette` function or a vector of hex codes? Default to the former with `TRUE` +#' @param show_palettes Should the ouput be the set of palettes names to pick from? Default to `FALSE` +#' @param ... Additional arguments to pass to colorRampPalette() +#' +#' @return A color palette +#' +#' @export +pal_agora <- function(palette = "main", reverse = FALSE, color_ramp_palette = FALSE, show_palettes = FALSE, ...) { + + + palettes_agora <- list( + `main` = cols_agora("main_grey", "main_red", "main_lt_grey", "main_beige"), + `primary` = cols_agora("main_grey", "main_red"), + `secondary` = cols_agora("main_lt_grey", "main_beige"), + `two_dots` = cols_agora("two_dots_1", "two_dots_2"), + `two_dots_flashy` = cols_agora("two_dots_flashy_1", "two_dots_flashy_2"), + `red_main` = cols_agora("red_main_1", "red_main_2", "red_main_3", "red_main_4", "red_main_5"), + `red_alt` = cols_agora("red_alt_1", "red_alt_2", "red_alt_3", "red_alt_4", "red_alt_5"), + `iroise` = cols_agora("iroise_1", "iroise_2", "iroise_3", "iroise_4", "iroise_5"), + `discrete_6` = cols_agora("dk_grey", "red_main_1", "main_beige", "red_main_2", "lt_grey_2", "red_4") + ) + + if (show_palettes) return(names(palettes_agora)) + + pal <- palettes_agora[[palette]] + + if (reverse) pal <- rev(pal) + + if (color_ramp_palette) { + rlang::check_installed("grDevices", reason = "Package \"grDevices\" needed for `pal_agora()` woth 'color_ramp_palette' set to `TRUE` to work. Please install it.") + + pal <- grDevices::colorRampPalette(pal, ...) + } + + return(pal) +} diff --git a/R/pal_reach.R b/R/pal_reach.R new file mode 100644 index 0000000..4fd58bf --- /dev/null +++ b/R/pal_reach.R @@ -0,0 +1,40 @@ +#' @title Return function to interpolate a REACH color palette +#' +#' @param palette Character name of a palette in REACH palettes +#' @param reverse Boolean indicating whether the palette should be reversed +#' @param color_ramp_palette Should the output be a `grDevices::colorRampPalette` function or a vector of hex codes? Default to the former with `TRUE` +#' @param show_palettes Should the ouput be the set of palettes names to pick from? Default to `FALSE` +#' @param ... Additional arguments to pass to colorRampPalette() +#' +#' @return A color palette +#' +#' @export +pal_reach <- function(palette = "main", reverse = FALSE, color_ramp_palette = FALSE, show_palettes = FALSE, ...) { + + + palettes_reach <- list( + `main` = cols_reach("main_grey", "main_red", "main_lt_grey", "main_beige"), + `primary` = cols_reach("main_grey", "main_red"), + `secondary` = cols_reach("main_lt_grey", "main_beige"), + `two_dots` = cols_reach("two_dots_1", "two_dots_2"), + `two_dots_flashy` = cols_reach("two_dots_flashy_1", "two_dots_flashy_2"), + `red_main` = cols_reach("red_main_1", "red_main_2", "red_main_3", "red_main_4", "red_main_5"), + `red_alt` = cols_reach("red_alt_1", "red_alt_2", "red_alt_3", "red_alt_4", "red_alt_5"), + `iroise` = cols_reach("iroise_1", "iroise_2", "iroise_3", "iroise_4", "iroise_5"), + `discrete_6` = cols_reach("dk_grey", "red_main_1", "main_beige", "red_main_2", "lt_grey_2", "red_4") + ) + + if (show_palettes) return(names(palettes_reach)) + + pal <- palettes_reach[[palette]] + + if (reverse) pal <- rev(pal) + + if (color_ramp_palette) { + rlang::check_installed("grDevices", reason = "Package \"grDevices\" needed for `pal_reach()` woth 'color_ramp_palette' set to `TRUE` to work. Please install it.") + + pal <- grDevices::colorRampPalette(pal, ...) + } + + return(pal) +} diff --git a/R/scale.R b/R/scale.R new file mode 100644 index 0000000..ae7671b --- /dev/null +++ b/R/scale.R @@ -0,0 +1,77 @@ +#' Color scale constructor for REACH or AGORA colors +#' +#' @param initiative Either "reach" or "agora +#' @param palette Character name of palette in drsimonj_palettes +#' @param discrete Boolean indicating whether color aesthetic is discrete or not +#' @param reverse Boolean indicating whether the palette should be reversed +#' @param ... Additional arguments passed to discrete_scale() or +#' scale_color_gradientn(), used respectively when discrete is TRUE or FALSE +#' @return A color scale for ggplot +#' +#' @export +scale_color <- function(initiative = "reach", palette = "main", discrete = TRUE, reverse = FALSE, ...) { + + if (initiative == "reach") { + pal <- pal_reach( + palette = palette, + reverse = reverse, + color_ramp_palette = TRUE, + show_palettes = FALSE + ) + } else if (initiative == "agora") { + pal <- pal_agora( + palette = palette, + reverse = reverse, + color_ramp_palette = TRUE, + show_palettes = FALSE + ) + } else { + rlang::abort(c("Wrong initiative parameter input", "*" = paste0(initiative, "is not an option"), "i" = "Parameter 'initiative' should be one of 'reach' or 'agora'")) + } + + if (discrete) { + ggplot2::discrete_scale("colour", paste0(initiative, "_", palette), palette = pal, ...) + } else { + ggplot2::scale_color_gradientn(colours = pal(256), ...) + } +} + + + +#' Fill scale constructor for REACH or AGORA colors +#' +#' @param initiative Either "reach" or "agora +#' @param palette Character name of palette in drsimonj_palettes +#' @param discrete Boolean indicating whether color aesthetic is discrete or not +#' @param reverse Boolean indicating whether the palette should be reversed +#' @param ... Additional arguments passed to discrete_scale() or +#' scale_fill_gradientn(), used respectively when discrete is TRUE or FALSE +#' @return A fill scale for ggplot +#' +#' @export +scale_color <- function(initiative = "reach", palette = "main", discrete = TRUE, reverse = FALSE, ...) { + + if (initiative == "reach") { + pal <- pal_reach( + palette = palette, + reverse = reverse, + color_ramp_palette = TRUE, + show_palettes = FALSE + ) + } else if (initiative == "agora") { + pal <- pal_agora( + palette = palette, + reverse = reverse, + color_ramp_palette = TRUE, + show_palettes = FALSE + ) + } else { + rlang::abort(c("Wrong initiative parameter input", "*" = paste0(initiative, "is not an option"), "i" = "Parameter 'initiative' should be one of 'reach' or 'agora'")) + } + + if (discrete) { + ggplot2::discrete_scale("fill", paste0(initiative, "_", palette), palette = pal, ...) + } else { + ggplot2::scale_fill_gradientn(colours = pal(256), ...) + } +} diff --git a/R/theme_reach.R b/R/theme_reach.R new file mode 100644 index 0000000..c64caf2 --- /dev/null +++ b/R/theme_reach.R @@ -0,0 +1,91 @@ +#' @title Base REACH ggplot2 theme +#' +#' @param family The font family. Default to "Leelawadee" +#' +#' @description Give some reach colors and fonts to a ggplot. Based on theme_bw() +#' +#' @return The base REACH theme +#' +theme_reach <- function(family = "Leelawadee") { + + rlang::check_installed("ggplot2", reason = "Package \"ggplot2\" needed for `theme_reach_*()` to work. Please install it.") + + ggplot2::theme_bw() + + ggplot2::theme( + title = ggplot2::element_text(family = family, + size = 12, + colour = "#58585A", + hjust = 0.5, + vjust = 0.5), + text = ggplot2::element_text(family = family, + colour = "#58585A"), + axis.title = ggplot2::element_text(size = 11), + axis.text = ggplot2::element_text(size = 10), + legend.text = ggplot2::element_text(size = 11), + strip.text = ggplot2::element_text(size = 11), + legend.title = ggplot2::element_text(size = 11) + ) +} + + + +#' @title Some REACH theme for ggplot +#' +#' @param family The font family. Default to "Leelawadee" +#' +#' @return A theme to be added to the "+" ggplot grammar +#' +#' @export +theme_reach_borders <- function(family = "Leelawadee") { + + theme_reach() + + ggplot2::theme( + panel.background = ggplot2::element_rect(colour = "white", fill = "white", size = 0.5), + strip.background = ggplot2::element_rect(linetype = "solid", colour = "#58585A", fill = "white") + ) +} + + + +#' @title Some reach more minimal theme for ggplot +#' +#' @param family The font family. Default to "Leelawadee" +#' +#' @description Give some REACH colors and fonts to a ggplot. Based on theme_bw(). To be used for vertical bar charts. +#' +#' @return A theme to be added to the "+" ggplot grammar +#' +#' @export +theme_reach_hist <- function(family = "Leelawadee") { + + theme_reach() + + ggplot2::theme( + panel.background = ggplot2::element_blank(), + strip.background = ggplot2::element_blank(), + panel.border = ggplot2::element_blank() + ) +} + + +#' @title Some reach more minimal theme for ggplot +#' +#' @param family The font family. Default to "Leelawadee" +#' +#' @description Give some REACH colors and fonts to a ggplot. Based on theme_bw(). To be used for horizontal bar charts. +#' +#' @return A theme to be added to the "+" ggplot grammar +#' +#' @export +theme_reach_flip_hist <- function(family = "Leelawadee") { + + theme_reach() + + ggplot2::theme( + panel.background = ggplot2::element_blank(), + strip.background = ggplot2::element_blank(), + panel.border = ggplot2::element_blank(), + axis.ticks.y = ggplot2::element_blank() + ) +} + + + diff --git a/README.Rmd b/README.Rmd new file mode 100644 index 0000000..36a8106 --- /dev/null +++ b/README.Rmd @@ -0,0 +1,55 @@ +--- +output: github_document +--- + + + +```{r, include = FALSE} +knitr::opts_chunk$set( + collapse = TRUE, + comment = "#>", + fig.path = "man/figures/README-", + out.width = "100%" +) +``` + +# visualizeR + + + + +The goal of visualizeR is to propose some utils to get REACH and AGORA colors, ready-to-go color palettes, and a few visualization functions (horizontal hist graph for instance). + +## Installation + +You can install the last version of visualizeR from +[GitHub](https://github.com/) with: + +```{r, eval = FALSE} +# install.packages("devtools") +devtools::install_github("gnoblet/visualizeR", build_vignettes = TRUE) +``` + +## Roadmap + +Roadmap is as follows: + +- [ ] Add IMPACT's colors +- [ ] Add all color palettes from the internal documentation +- [ ] Add new types of visualization (e.g. dumbbell plot) +- [ ] Use examples +- [ ] Add some ease-map functions +- [ ] Add some interactive functions (maps and graphs) + +## Request + +Please, do not hesitate to pull request any new viz or colors or color palettes, or to email request any change (guillaume.noblet@reach-initiative.org or gnoblet@zaclys.net). + + +## Example + +```{r example, eval = FALSE} +library(visualizeR) +# Get all saved REACH colors, named +cols_reach(unnamed = F) +``` diff --git a/_pkgdown.yml b/_pkgdown.yml new file mode 100644 index 0000000..da14fc6 --- /dev/null +++ b/_pkgdown.yml @@ -0,0 +1,4 @@ +url: ~ +template: + bootstrap: 5 + diff --git a/man/cols_agora.Rd b/man/cols_agora.Rd new file mode 100644 index 0000000..29f603a --- /dev/null +++ b/man/cols_agora.Rd @@ -0,0 +1,22 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/cols_agora.R +\name{cols_agora} +\alias{cols_agora} +\title{Function to extract AGORA colors as hex codes} +\usage{ +cols_agora(..., unnamed = TRUE) +} +\arguments{ +\item{...}{Character names of reach colors. If NULL returns all colors} + +\item{unnamed}{Should the output vector be unnamed? Default to `TRUE`} +} +\value{ +An hex code or hex codes named or unnamed +} +\description{ +Function to extract AGORA colors as hex codes +} +\details{ +This function needs to be modified to add colors +} diff --git a/man/cols_reach.Rd b/man/cols_reach.Rd new file mode 100644 index 0000000..7c0ed87 --- /dev/null +++ b/man/cols_reach.Rd @@ -0,0 +1,22 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/cols_reach.R +\name{cols_reach} +\alias{cols_reach} +\title{Function to extract REACH colors as hex codes} +\usage{ +cols_reach(..., unnamed = TRUE) +} +\arguments{ +\item{...}{Character names of reach colors. If NULL returns all colors} + +\item{unnamed}{Should the output vector be unnamed? Default to `TRUE`} +} +\value{ +An hex code or hex codes named or unnamed +} +\description{ +Function to extract REACH colors as hex codes +} +\details{ +This function needs to be modified to add colors +} diff --git a/man/pal_agora.Rd b/man/pal_agora.Rd new file mode 100644 index 0000000..71b9921 --- /dev/null +++ b/man/pal_agora.Rd @@ -0,0 +1,31 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/pal_agora.R +\name{pal_agora} +\alias{pal_agora} +\title{Return function to interpolate an AGORA color palette} +\usage{ +pal_agora( + palette = "main", + reverse = FALSE, + color_ramp_palette = FALSE, + show_palettes = FALSE, + ... +) +} +\arguments{ +\item{palette}{Character name of a palette in AGORA palettes} + +\item{reverse}{Boolean indicating whether the palette should be reversed} + +\item{color_ramp_palette}{Should the output be a `grDevices::colorRampPalette` function or a vector of hex codes? Default to the former with `TRUE`} + +\item{show_palettes}{Should the ouput be the set of palettes names to pick from? Default to `FALSE`} + +\item{...}{Additional arguments to pass to colorRampPalette()} +} +\value{ +A color palette +} +\description{ +Return function to interpolate an AGORA color palette +} diff --git a/man/pal_reach.Rd b/man/pal_reach.Rd new file mode 100644 index 0000000..4d32f98 --- /dev/null +++ b/man/pal_reach.Rd @@ -0,0 +1,31 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/pal_reach.R +\name{pal_reach} +\alias{pal_reach} +\title{Return function to interpolate a REACH color palette} +\usage{ +pal_reach( + palette = "main", + reverse = FALSE, + color_ramp_palette = FALSE, + show_palettes = FALSE, + ... +) +} +\arguments{ +\item{palette}{Character name of a palette in REACH palettes} + +\item{reverse}{Boolean indicating whether the palette should be reversed} + +\item{color_ramp_palette}{Should the output be a `grDevices::colorRampPalette` function or a vector of hex codes? Default to the former with `TRUE`} + +\item{show_palettes}{Should the ouput be the set of palettes names to pick from? Default to `FALSE`} + +\item{...}{Additional arguments to pass to colorRampPalette()} +} +\value{ +A color palette +} +\description{ +Return function to interpolate a REACH color palette +} diff --git a/man/scale_color.Rd b/man/scale_color.Rd new file mode 100644 index 0000000..adc0cfc --- /dev/null +++ b/man/scale_color.Rd @@ -0,0 +1,44 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/scale.R +\name{scale_color} +\alias{scale_color} +\title{Color scale constructor for REACH or AGORA colors} +\usage{ +scale_color( + initiative = "reach", + palette = "main", + discrete = TRUE, + reverse = FALSE, + ... +) + +scale_color( + initiative = "reach", + palette = "main", + discrete = TRUE, + reverse = FALSE, + ... +) +} +\arguments{ +\item{initiative}{Either "reach" or "agora} + +\item{palette}{Character name of palette in drsimonj_palettes} + +\item{discrete}{Boolean indicating whether color aesthetic is discrete or not} + +\item{reverse}{Boolean indicating whether the palette should be reversed} + +\item{...}{Additional arguments passed to discrete_scale() or +scale_fill_gradientn(), used respectively when discrete is TRUE or FALSE} +} +\value{ +A color scale for ggplot + +A fill scale for ggplot +} +\description{ +Color scale constructor for REACH or AGORA colors + +Fill scale constructor for REACH or AGORA colors +} diff --git a/man/theme_reach.Rd b/man/theme_reach.Rd new file mode 100644 index 0000000..7c760db --- /dev/null +++ b/man/theme_reach.Rd @@ -0,0 +1,17 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/theme_reach.R +\name{theme_reach} +\alias{theme_reach} +\title{Base REACH ggplot2 theme} +\usage{ +theme_reach(family = "Leelawadee") +} +\arguments{ +\item{family}{The font family. Default to "Leelawadee"} +} +\value{ +The base REACH theme +} +\description{ +Give some reach colors and fonts to a ggplot. Based on theme_bw() +} diff --git a/man/theme_reach_borders.Rd b/man/theme_reach_borders.Rd new file mode 100644 index 0000000..c6cc1b6 --- /dev/null +++ b/man/theme_reach_borders.Rd @@ -0,0 +1,17 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/theme_reach.R +\name{theme_reach_borders} +\alias{theme_reach_borders} +\title{Some REACH theme for ggplot} +\usage{ +theme_reach_borders(family = "Leelawadee") +} +\arguments{ +\item{family}{The font family. Default to "Leelawadee"} +} +\value{ +A theme to be added to the "+" ggplot grammar +} +\description{ +Some REACH theme for ggplot +} diff --git a/man/theme_reach_flip_hist.Rd b/man/theme_reach_flip_hist.Rd new file mode 100644 index 0000000..a23c795 --- /dev/null +++ b/man/theme_reach_flip_hist.Rd @@ -0,0 +1,17 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/theme_reach.R +\name{theme_reach_flip_hist} +\alias{theme_reach_flip_hist} +\title{Some reach more minimal theme for ggplot} +\usage{ +theme_reach_flip_hist(family = "Leelawadee") +} +\arguments{ +\item{family}{The font family. Default to "Leelawadee"} +} +\value{ +A theme to be added to the "+" ggplot grammar +} +\description{ +Give some REACH colors and fonts to a ggplot. Based on theme_bw(). To be used for horizontal bar charts. +} diff --git a/man/theme_reach_hist.Rd b/man/theme_reach_hist.Rd new file mode 100644 index 0000000..bb193cd --- /dev/null +++ b/man/theme_reach_hist.Rd @@ -0,0 +1,17 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/theme_reach.R +\name{theme_reach_hist} +\alias{theme_reach_hist} +\title{Some reach more minimal theme for ggplot} +\usage{ +theme_reach_hist(family = "Leelawadee") +} +\arguments{ +\item{family}{The font family. Default to "Leelawadee"} +} +\value{ +A theme to be added to the "+" ggplot grammar +} +\description{ +Give some REACH colors and fonts to a ggplot. Based on theme_bw(). To be used for vertical bar charts. +} diff --git a/visualizeR.Rproj b/visualizeR.Rproj new file mode 100644 index 0000000..b9255bc --- /dev/null +++ b/visualizeR.Rproj @@ -0,0 +1,20 @@ +Version: 1.0 + +RestoreWorkspace: Default +SaveWorkspace: Default +AlwaysSaveHistory: Default + +EnableCodeIndexing: Yes +UseSpacesForTab: Yes +NumSpacesForTab: 2 +Encoding: UTF-8 + +RnwWeave: Sweave +LaTeX: pdfLaTeX + +AutoAppendNewline: Yes +StripTrailingWhitespace: Yes + +BuildType: Package +PackageUseDevtools: Yes +PackageInstallArgs: --no-multiarch --with-keep.source